RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 POC5Q8NA72 575 aa16.2■□□□□ 0.18
NEDD8-201ENST00000250495 OR5T1Q8NG75 326 aa16.2■□□□□ 0.18
NEDD8-201ENST00000250495 OR10J5Q8NHC4 309 aa16.2■□□□□ 0.18
NEDD8-201ENST00000250495 DCUN1D5Q9BTE7 237 aa16.2■□□□□ 0.18
NEDD8-201ENST00000250495 DIRAS3O95661 229 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 CD36P16671 472 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 ZP3P21754 424 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 GADD45AP24522 165 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 CBX3Q13185 183 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 MOGAT2Q3SYC2 334 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 OVCH2Q7RTZ1 564 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 CENPOQ9BU64 300 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 OR2D2Q9H210 308 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 SDHAF2Q9NX18 166 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 KCNK7Q9Y2U2 307 aa16.19■□□□□ 0.18
NEDD8-201ENST00000250495 TRBV6-7A0A0A0MS04 114 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 IGLV2-23P01705 113 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 FRMD6-AS1P0C7T7 363 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 GSTT2P0CG29 244 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 GSTT2BP0CG30 244 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 TIMM50Q3ZCQ8 353 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 IGSF11Q5DX21 431 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 OR10R2Q8NGX6 335 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 RCHY1Q96PM5 261 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 CABLES2Q9BTV7 478 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 ZMAT4Q9H898 229 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 STUB1Q9UNE7 303 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 RBM7Q9Y580 266 aaKnown RBP16.18■□□□□ 0.18
NEDD8-201ENST00000250495 STAB2Q8WWQ8 2551 aa16.18■□□□□ 0.18
NEDD8-201ENST00000250495 TRAV1-2A0A0B4J238 106 aa16.17■□□□□ 0.18
NEDD8-201ENST00000250495 CRYGBP07316 175 aa16.17■□□□□ 0.18
NEDD8-201ENST00000250495 FCGR3AP08637 254 aa16.17■□□□□ 0.18
NEDD8-201ENST00000250495 PLA2G7Q13093 441 aa16.17■□□□□ 0.18
NEDD8-201ENST00000250495 HARBI1Q96MB7 349 aa16.17■□□□□ 0.18
NEDD8-201ENST00000250495 METTL21EPA6NDL7 271 aa16.16■□□□□ 0.18
NEDD8-201ENST00000250495 SHOXO15266 292 aa16.16■□□□□ 0.18
NEDD8-201ENST00000250495 BRI3O95415 125 aa16.16■□□□□ 0.18
NEDD8-201ENST00000250495 RRASP10301 218 aa16.16■□□□□ 0.18
NEDD8-201ENST00000250495 ZNF182P17025 639 aaPredicted RBP16.16■□□□□ 0.18
NEDD8-201ENST00000250495 PJVKQ0ZLH3 352 aa16.16■□□□□ 0.18
NEDD8-201ENST00000250495 SPCS2Q15005 226 aa16.16■□□□□ 0.18
NEDD8-201ENST00000250495 RTL8BQ17RB0 113 aa16.16■□□□□ 0.18
NEDD8-201ENST00000250495 TMEM177Q53S58 311 aa16.16■□□□□ 0.18
NEDD8-201ENST00000250495 BVESQ8NE79 360 aa16.16■□□□□ 0.18
NEDD8-201ENST00000250495 IFITM5A6NNB3 132 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 IGLV1-51P01701 117 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 GNB3P16520 340 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 RAB6AP20340 208 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 AADACP22760 399 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 TALDO1P37837 337 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 SSBP2P81877 361 aaPredicted RBP16.15■□□□□ 0.18
NEDD8-201ENST00000250495 SRSF7Q16629 238 aaKnown RBP eCLIP16.15■□□□□ 0.18
NEDD8-201ENST00000250495 MUC7Q8TAX7 377 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 ADTRPQ96IZ2 230 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 GINS4Q9BRT9 223 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 RSRP1Q9BUV0 290 aa16.15■□□□□ 0.18
NEDD8-201ENST00000250495 A0A075B6Q4 140 aa16.14■□□□□ 0.17
NEDD8-201ENST00000250495 ANKRD34BA5PLL1 514 aa16.14■□□□□ 0.17
NEDD8-201ENST00000250495 RAB27BO00194 218 aa16.14■□□□□ 0.17
NEDD8-201ENST00000250495 MFNGO00587 321 aa16.14■□□□□ 0.17
NEDD8-201ENST00000250495 AIREO43918 545 aa16.14■□□□□ 0.17
NEDD8-201ENST00000250495 HIST1H1DP16402 221 aaKnown RBP16.14■□□□□ 0.17
NEDD8-201ENST00000250495 MYL9P24844 172 aa16.14■□□□□ 0.17
NEDD8-201ENST00000250495 ARFRP1Q13795 201 aa16.14■□□□□ 0.17
NEDD8-201ENST00000250495 TINAGL1Q9GZM7 467 aaPredicted RBP16.14■□□□□ 0.17
NEDD8-201ENST00000250495 ZNF230Q9UIE0 474 aaPredicted RBP16.14■□□□□ 0.17
NEDD8-201ENST00000250495 RYR3Q15413 4870 aa16.14■□□□□ 0.17
NEDD8-201ENST00000250495 HUWE1Q7Z6Z7 4374 aaKnown RBP16.13■□□□□ 0.17
NEDD8-201ENST00000250495 SRRM4A7MD48 611 aaKnown RBP16.13■□□□□ 0.17
NEDD8-201ENST00000250495 RAB3BP20337 219 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 OR10A3P58181 314 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 KLF5Q13887 457 aaPredicted RBP16.13■□□□□ 0.17
NEDD8-201ENST00000250495 ARL6IP1Q15041 203 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 SSX1Q16384 188 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 TATDN3Q17R31 274 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 VMA21Q3ZAQ7 101 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 Q6ZS49 121 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 TEX45Q8NA69 505 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 DYNC2LI1Q8TCX1 351 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 MAFIPQ8WZ33 124 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 USMG5Q96IX5 58 aa16.13■□□□□ 0.17
NEDD8-201ENST00000250495 PEF1Q9UBV8 284 aaKnown RBP16.13■□□□□ 0.17
NEDD8-201ENST00000250495 TRDV1A0A1B0GX56 115 aa16.12■□□□□ 0.17
NEDD8-201ENST00000250495 HAPLN4Q86UW8 402 aa16.12■□□□□ 0.17
NEDD8-201ENST00000250495 CROCCP3Q8IVE0 287 aa16.12■□□□□ 0.17
NEDD8-201ENST00000250495 SGPP2Q8IWX5 399 aa16.12■□□□□ 0.17
NEDD8-201ENST00000250495 OR9G4Q8NGQ1 327 aa16.12■□□□□ 0.17
NEDD8-201ENST00000250495 PHB2Q99623 299 aa16.12■□□□□ 0.17
NEDD8-201ENST00000250495 NDUFB11Q9NX14 153 aa16.12■□□□□ 0.17
NEDD8-201ENST00000250495 COA4Q9NYJ1 87 aa16.12■□□□□ 0.17
NEDD8-201ENST00000250495 SHISA3A0PJX4 238 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 MSGN1A6NI15 193 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 A8MZ25 164 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 H0Y980 276 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 DUTP33316 252 aaKnown RBP16.11■□□□□ 0.17
NEDD8-201ENST00000250495 UBE2KP61086 200 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 VBP1P61758 197 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 NCS1P62166 190 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 CASC10Q5T4H9 136 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 ZNF343Q6P1L6 599 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms