RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 Q8TCH9 128 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 SMDT1Q9H4I9 107 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 SMCO4Q9NRQ5 59 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 ZNF835Q9Y2P0 537 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 COLCA2A8K830 154 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 CEBPZOSA8MTT3 80 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 EIF3GO75821 320 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLN6-201ENST00000249806 ICAM4Q14773 271 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 LCN15Q6UWW0 184 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 RBMXL1Q96E39 390 aaKnown RBP17.91■□□□□ 0.46
CLN6-201ENST00000249806 COL25A1Q9BXS0 654 aaPredicted RBP17.91■□□□□ 0.46
CLN6-201ENST00000249806 HIPK2Q9H2X6 1198 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 KBTBD11-OT1A0A1B0GTJ5 212 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 SCAF4O95104 1147 aaKnown RBP17.91■□□□□ 0.46
CLN6-201ENST00000249806 HPRT1P00492 218 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 OR8U8P0C7N1 319 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 FAM87AP0C7U9 286 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 ELLP55199 621 aaPredicted RBP17.91■□□□□ 0.46
CLN6-201ENST00000249806 CT45A1Q5HYN5 189 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 TCF23Q7RTU1 214 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 CT45A3Q8NHU0 189 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 JKAMPQ9P055 326 aa17.91■□□□□ 0.46
CLN6-201ENST00000249806 PUS1Q9Y606 427 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLN6-201ENST00000249806 HBE1P02100 147 aa17.9■□□□□ 0.46
CLN6-201ENST00000249806 SRP19P09132 144 aaKnown RBP17.9■□□□□ 0.46
CLN6-201ENST00000249806 FGF8P55075 233 aaPredicted RBP17.9■□□□□ 0.46
CLN6-201ENST00000249806 POLEQ07864 2286 aa17.9■□□□□ 0.46
CLN6-201ENST00000249806 SERF2P84101 59 aa17.9■□□□□ 0.46
CLN6-201ENST00000249806 ADAM5Q6NVV9 412 aa17.9■□□□□ 0.46
CLN6-201ENST00000249806 ZNF788Q6ZQV5 615 aa17.9■□□□□ 0.46
CLN6-201ENST00000249806 ZNF665Q9H7R5 613 aa17.9■□□□□ 0.46
CLN6-201ENST00000249806 GFOD1Q9NXC2 390 aa17.9■□□□□ 0.46
CLN6-201ENST00000249806 MLXQ9UH92 298 aa17.9■□□□□ 0.46
CLN6-201ENST00000249806 TRGV10A0A0A0MS01 117 aa17.89■□□□□ 0.45
CLN6-201ENST00000249806 CRYBA1P05813 215 aa17.89■□□□□ 0.45
CLN6-201ENST00000249806 IRF2P14316 349 aa17.89■□□□□ 0.45
CLN6-201ENST00000249806 CTRB1P17538 263 aa17.89■□□□□ 0.45
CLN6-201ENST00000249806 RAB2AP61019 212 aa17.89■□□□□ 0.45
CLN6-201ENST00000249806 CTRB2Q6GPI1 263 aa17.89■□□□□ 0.45
CLN6-201ENST00000249806 OR10P1Q8NGE3 313 aa17.89■□□□□ 0.45
CLN6-201ENST00000249806 ISOC2Q96AB3 205 aa17.89■□□□□ 0.45
CLN6-201ENST00000249806 RCC1LQ96I51 464 aaKnown RBP17.89■□□□□ 0.45
CLN6-201ENST00000249806 PARD6GQ9BYG4 376 aaPredicted RBP17.89■□□□□ 0.45
CLN6-201ENST00000249806 GNG13Q9P2W3 67 aa17.89■□□□□ 0.45
CLN6-201ENST00000249806 TET2Q6N021 2002 aaPredicted RBP17.88■□□□□ 0.45
CLN6-201ENST00000249806 TRAV1-1A0A0B4J248 108 aa17.88■□□□□ 0.45
CLN6-201ENST00000249806 IFNA17P01571 189 aa17.88■□□□□ 0.45
CLN6-201ENST00000249806 ZNF506Q5JVG8 444 aa17.88■□□□□ 0.45
CLN6-201ENST00000249806 S1PR3Q99500 378 aa17.88■□□□□ 0.45
CLN6-201ENST00000249806 NCOR1P1Q9H4R4 102 aa17.88■□□□□ 0.45
CLN6-201ENST00000249806 C17orf100A8MU93 164 aa17.88■□□□□ 0.45
CLN6-201ENST00000249806 MMP23AO75900 390 aa17.88■□□□□ 0.45
CLN6-201ENST00000249806 PRAMEF5Q5TYX0 476 aa17.88■□□□□ 0.45
CLN6-201ENST00000249806 CYB561D1Q8N8Q1 229 aa17.88■□□□□ 0.45
CLN6-201ENST00000249806 CIB3Q96Q77 187 aaPredicted RBP17.88■□□□□ 0.45
CLN6-201ENST00000249806 SAA2-SAA4A0A096LPE2 208 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 TRAV3A0A0B4J244 114 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 TMPRSS2O15393 492 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 SAA2P0DJI9 122 aaPredicted RBP17.87■□□□□ 0.45
CLN6-201ENST00000249806 ERVFRD-1P60508 538 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 ZNF787Q6DD87 383 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 WFIKKN1Q96NZ8 548 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 IGKV1D-33P01593 117 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 IGKV1-33P01594 117 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 FLI1Q01543 452 aaPredicted RBP17.87■□□□□ 0.45
CLN6-201ENST00000249806 TMEM41BQ5BJD5 291 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 KDF1Q8NAX2 398 aaPredicted RBP17.87■□□□□ 0.45
CLN6-201ENST00000249806 MBD3L1Q8WWY6 194 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 PRELID3BQ9Y3B1 194 aa17.87■□□□□ 0.45
CLN6-201ENST00000249806 ZFP92A6NM28 416 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 HSPB1P04792 205 aaKnown RBP17.86■□□□□ 0.45
CLN6-201ENST00000249806 TEX36Q5VZQ5 186 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 FAM216AQ8WUB2 273 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 DDB2Q92466 427 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 TMEM147Q9BVK8 224 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 ARG1P05089 322 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 TNFRSF1AP19438 455 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 GNG10P50151 68 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 RAB7AP51149 207 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 TFF3Q07654 80 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 ATP6V1FQ16864 119 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 LYG1Q8N1E2 194 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 RPP25LQ8N5L8 163 aaKnown RBP17.86■□□□□ 0.45
CLN6-201ENST00000249806 OR4A16Q8NH70 328 aa17.86■□□□□ 0.45
CLN6-201ENST00000249806 PINX1Q96BK5 328 aaKnown RBP17.86■□□□□ 0.45
CLN6-201ENST00000249806 C15orf62A8K5M9 175 aa17.85■□□□□ 0.45
CLN6-201ENST00000249806 ACSM6Q6P461 480 aa17.85■□□□□ 0.45
CLN6-201ENST00000249806 ZNF251Q9BRH9 671 aa17.85■□□□□ 0.45
CLN6-201ENST00000249806 IGF2RP11717 2491 aa17.85■□□□□ 0.45
CLN6-201ENST00000249806 LOC102723971A0A1B0GUV8 181 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 H3BQ15 152 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 RBFOX2O43251 390 aaKnown RBP eCLIP17.84■□□□□ 0.45
CLN6-201ENST00000249806 NQO2P16083 231 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 NDUFB7P17568 137 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 FGF7P21781 194 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 KHDC3LQ587J8 217 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 AVPI1Q5T686 147 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 C15orf54Q8N8G6 183 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 ITGB1BP1O14713 200 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 ERVK-16P61578 105 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms