RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 VAX2Q9UIW0 290 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 URGCP-MRPS24S4R325 110 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 DSCAML1Q8TD84 2053 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 YPEL1O60688 119 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 CXCL1P09341 107 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 SELLP14151 372 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 EDDM3BP56851 147 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 FABP9Q0Z7S8 132 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 RPL39P5Q59GN2 51 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 RBMXL3Q8N7X1 1067 aaKnown RBP16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 LHX4Q969G2 390 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 YPEL2Q96QA6 119 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 FAM234AQ9H0X4 552 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 RBMS3Q6XE24 437 aaKnown RBP16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 C1QL4Q86Z23 238 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 SLC25A22Q9H936 323 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 SEBOXQ9HB31 216 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 ICE1Q9Y2F5 2266 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 IGLV3-9A0A075B6K5 115 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 RPS10P46783 165 aaKnown RBP16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 VWC2Q2TAL6 325 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 SSX9Q7RTT3 188 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 PPP1R35Q8TAP8 253 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 P2RX4Q99571 388 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 IFI27L2Q9H2X8 130 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 TMPRSS5Q9H3S3 457 aa16.19■□□□□ 0.18
CDC42EP1-201ENST00000249014 TET2Q6N021 2002 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP1-201ENST00000249014 C15orf62A8K5M9 175 aa16.18■□□□□ 0.18
CDC42EP1-201ENST00000249014 M0R1X1 148 aa16.18■□□□□ 0.18
CDC42EP1-201ENST00000249014 F2RL2O00254 374 aa16.18■□□□□ 0.18
CDC42EP1-201ENST00000249014 C1orf229Q6ZS94 237 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP1-201ENST00000249014 VKORC1L1Q8N0U8 176 aa16.18■□□□□ 0.18
CDC42EP1-201ENST00000249014 NPCDR1Q9BY65 106 aa16.18■□□□□ 0.18
CDC42EP1-201ENST00000249014 METTL1Q9UBP6 276 aaKnown RBP16.18■□□□□ 0.18
CDC42EP1-201ENST00000249014 RAI1Q7Z5J4 1906 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP1-201ENST00000249014 SLC31A2O15432 143 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 HPRT1P00492 218 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 MDKP21741 143 aaPredicted RBP16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 TIMP3P35625 211 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 GNB2P62879 340 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 RTP5Q14D33 572 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 SIRT7Q9NRC8 400 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 TGIF2-C20orf24A0A0A6YYL0 155 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 CXorf65A6NEN9 183 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 IFNA17P01571 189 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 NQO2P16083 231 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 CD81P60033 236 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 TLE1Q04724 770 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 FAM27E3Q08E93 113 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 TCF15Q12870 199 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 PMS2P11Q13670 270 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 FFAR4Q5NUL3 377 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 DUX4L9Q6RFH8 374 aaPredicted RBP16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 OR10G9Q8NGN4 311 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 OR10G7Q8NGN6 311 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 LEAP2Q969E1 77 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 CALYQ9NYX4 217 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 OR6C3Q9NZP0 311 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 TANC2Q9HCD6 1990 aa16.17■□□□□ 0.18
CDC42EP1-201ENST00000249014 CGB3P0DN86 165 aa16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 CGB7P0DN87 165 aa16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 C3orf36Q3SXR2 165 aa16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 AARDQ4LEZ3 155 aa16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 SDF2L1Q9HCN8 221 aa16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 B4DEV8 164 aa16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 IFNA1P01562 189 aa16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 DEFA4P12838 97 aa16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 C17orf58Q2M2W7 97 aa16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 WDR25Q64LD2 544 aaPredicted RBP16.16■□□□□ 0.18
CDC42EP1-201ENST00000249014 PLCE1Q9P212 2302 aa16.15■□□□□ 0.18
CDC42EP1-201ENST00000249014 CTXND1A0A1B0GTU2 59 aa16.15■□□□□ 0.18
CDC42EP1-201ENST00000249014 PNRC1Q12796 327 aaPredicted RBP16.15■□□□□ 0.18
CDC42EP1-201ENST00000249014 PRAMEF5Q5TYX0 476 aa16.15■□□□□ 0.18
CDC42EP1-201ENST00000249014 Q8N7P7 452 aa16.15■□□□□ 0.18
CDC42EP1-201ENST00000249014 TRAV3A0A0B4J244 114 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 AP4M1O00189 453 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 CEACAM8P31997 349 aaPredicted RBP16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 GATA4P43694 442 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 MEF2BQ02080 365 aaPredicted RBP16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 GATAD1Q8WUU5 269 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 SFXN3Q9BWM7 321 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 GCM1Q9NP62 436 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 KLK10O43240 276 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 MBP02144 154 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 FAM222BQ8WU58 562 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 FAM216AQ8WUB2 273 aa16.14■□□□□ 0.17
CDC42EP1-201ENST00000249014 FAM90A9PA6NNJ1 464 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 RBFOX2O43251 390 aaKnown RBP eCLIP16.13■□□□□ 0.175e-8■□□□□ 10.2
CDC42EP1-201ENST00000249014 OR4A16Q8NH70 328 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 DDB2Q92466 427 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 RAB24Q969Q5 203 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 RP1L1Q8IWN7 2480 aaPredicted RBP16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 RIF1Q5UIP0 2472 aaKnown RBP16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 A8MXE2 369 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 CYB5R3P00387 301 aaPredicted RBP16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 IGHV1-46P01743 117 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 CRYABP02511 175 aaKnown RBP16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 BMP5P22003 454 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 RELBQ01201 579 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 CT45A1Q5HYN5 189 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms