RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TOR1AO14656 332 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 TNFSF12O43508 249 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 CRLF1O75462 422 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 LY6HO94772 140 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 COL8A2P25067 703 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 RAB14P61106 215 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 AARDQ4LEZ3 155 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 MIDNQ504T8 468 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF585BQ52M93 769 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 TMEM200BQ69YZ2 307 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 C1orf122Q6ZSJ8 110 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 C5orf24Q7Z6I8 188 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 SPAG16Q8N0X2 631 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF525Q8N782 197 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 OR1S1Q8NH92 325 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 TMEM186Q96B77 213 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 MDFIQ99750 246 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 C19orf12Q9NSK7 152 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 PRR13Q9NZ81 148 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 CTSZQ9UBR2 303 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 SESN1Q9Y6P5 492 aa10.82□□□□□ -0.68
SLIRP-201ENST00000238688 FBN1P35555 2871 aaKnown RBP10.81□□□□□ -0.68
SLIRP-201ENST00000238688 F5H0A9 414 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-201ENST00000238688 WRBO00258 174 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 TXNL1O43396 289 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 CD5LO43866 347 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 FGF2P09038 288 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 P0C879 139 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 DLX6P56179 175 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 POU2AF1Q16633 256 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 CT45A1Q5HYN5 189 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF841Q6ZN19 808 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 FGFRL1Q8N441 504 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 KIR3DL3Q8N743 410 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 OR9G1Q8NH87 305 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 CT45A3Q8NHU0 189 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 UBALD1Q8TB05 177 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 SCARB1Q8WTV0 552 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 H1FXQ92522 213 aaKnown RBP10.81□□□□□ -0.68
SLIRP-201ENST00000238688 PCGF1Q9BSM1 259 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 PATZ1Q9HBE1 687 aaKnown RBP10.81□□□□□ -0.68
SLIRP-201ENST00000238688 WSB1Q9Y6I7 421 aa10.81□□□□□ -0.68
SLIRP-201ENST00000238688 IGHV3-43A0A0B4J1X8 118 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 M0R1W7 72 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 M0R1X1 148 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 NDUFS8O00217 210 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 PPIHO43447 177 aaKnown RBP10.8□□□□□ -0.68
SLIRP-201ENST00000238688 TSC22D2O75157 780 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 JTBO76095 146 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 LIPFP07098 398 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 IGHV3-43DP0DP04 118 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 TPT1P13693 172 aaKnown RBP10.8□□□□□ -0.68
SLIRP-201ENST00000238688 NQO2P16083 231 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF16P17020 682 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-201ENST00000238688 RPL12P30050 165 aaKnown RBP10.8□□□□□ -0.68
SLIRP-201ENST00000238688 LPAR6P43657 344 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 ERVK-16P61578 105 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF273Q14593 569 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 RTL8BQ17RB0 113 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 WDR25Q64LD2 544 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-201ENST00000238688 DUX4L9Q6RFH8 374 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-201ENST00000238688 LYPD2Q6UXB3 125 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 ZNF833PQ6ZTB9 187 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 LY6G5BQ8NDX9 201 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 C10orf105Q8TEF2 133 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 DDB2Q92466 427 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 CIB3Q96Q77 187 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-201ENST00000238688 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-201ENST00000238688 OR5AC2Q9NZP5 309 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 RNF150Q9ULK6 438 aa10.8□□□□□ -0.68
SLIRP-201ENST00000238688 SAA2-SAA4A0A096LPE2 208 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 VWC2LB2RUY7 222 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 HRASP01112 189 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 IGKV1-39P01597 117 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 IGKV1-5P01602 117 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 IGKV1D-39P04432 117 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 SAA2P0DJI9 122 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-201ENST00000238688 IGHV1-8P0DP01 117 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 NFYBP25208 207 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 GPR6P46095 362 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-201ENST00000238688 PRRX1P54821 245 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 ERVFRD-1P60508 538 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 RPL23AP62750 156 aaKnown RBP10.79□□□□□ -0.68
SLIRP-201ENST00000238688 VAMP2P63027 116 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 LOXL1Q08397 574 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-201ENST00000238688 PDLIM3Q53GG5 364 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-201ENST00000238688 CLLU1Q5K131 121 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 H2BFWTQ7Z2G1 175 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 FOXRED2Q8IWF2 684 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 BEND2Q8NDZ0 799 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 OR52E5Q8NH55 327 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 GPR146Q96CH1 333 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 C5orf30Q96GV9 206 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 C11orf1Q9H5F2 150 aa10.79□□□□□ -0.68
SLIRP-201ENST00000238688 LYRM2Q9NU23 88 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-201ENST00000238688 RCL1Q9Y2P8 373 aaKnown RBP10.79□□□□□ -0.68
SLIRP-201ENST00000238688 AMMECR1Q9Y4X0 333 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-201ENST00000238688 LSM5Q9Y4Y9 91 aaKnown RBP10.79□□□□□ -0.68
SLIRP-201ENST00000238688 SVEP1Q4LDE5 3571 aa10.78□□□□□ -0.68
SLIRP-201ENST00000238688 BORCS7-ASMTA0A0B4J1R7 106 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms