RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 KCTD9Q7L273 389 aa17.25■□□□□ 0.35
SLC25A39-201ENST00000225308 NPBQ8NG41 125 aa17.25■□□□□ 0.35
SLC25A39-201ENST00000225308 TRRAPQ9Y4A5 3859 aa17.24■□□□□ 0.35
SLC25A39-201ENST00000225308 PKD1L1Q8TDX9 2849 aa17.24■□□□□ 0.35
SLC25A39-201ENST00000225308 HAX1O00165 279 aa17.24■□□□□ 0.35
SLC25A39-201ENST00000225308 NDUFA3O95167 84 aa17.24■□□□□ 0.35
SLC25A39-201ENST00000225308 C9orf152Q5JTZ5 239 aa17.24■□□□□ 0.35
SLC25A39-201ENST00000225308 HSD17B10Q99714 261 aaKnown RBP17.24■□□□□ 0.35
SLC25A39-201ENST00000225308 LINC00854A0A1B0GVQ3 168 aa17.23■□□□□ 0.35
SLC25A39-201ENST00000225308 AKAIN1P0CW23 69 aa17.23■□□□□ 0.35
SLC25A39-201ENST00000225308 AADACL3Q5VUY0 350 aa17.23■□□□□ 0.35
SLC25A39-201ENST00000225308 ARRDC1Q8N5I2 433 aa17.23■□□□□ 0.35
SLC25A39-201ENST00000225308 BVESQ8NE79 360 aa17.23■□□□□ 0.35
SLC25A39-201ENST00000225308 DEDD2Q8WXF8 326 aa17.23■□□□□ 0.35
SLC25A39-201ENST00000225308 FLYWCH2Q96CP2 140 aaKnown RBP17.23■□□□□ 0.35
SLC25A39-201ENST00000225308 RNF5Q99942 180 aa17.23■□□□□ 0.35
SLC25A39-201ENST00000225308 ZNF747Q9BV97 191 aa17.23■□□□□ 0.35
SLC25A39-201ENST00000225308 TNFSF12O43508 249 aa17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 PEX14O75381 377 aa17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 RAB3DO95716 219 aa17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 VDAC2P45880 294 aaPredicted RBP17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 KRTAP10-3P60369 221 aa17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 DCTN2Q13561 401 aaKnown RBP17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 RTL8BQ17RB0 113 aa17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 C5orf64Q2M2E5 130 aa17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 ARSJQ5FYB0 599 aaPredicted RBP17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 ZBTB34Q8NCN2 500 aa17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 WNT10AQ9GZT5 417 aa17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 PALMDQ9NP74 551 aa17.22■□□□□ 0.35
SLC25A39-201ENST00000225308 IGHG2P01859 326 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 IFNA6P05013 189 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 BRWD1-AS2P59051 145 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 SRSF4Q08170 494 aaKnown RBP17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 TMEM177Q53S58 311 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 FAAP20Q6NZ36 180 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 ZNF66Q6ZN08 573 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 LHFPL1Q86WI0 220 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 KLHDC1Q8N7A1 406 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 RASL11BQ9BPW5 248 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 RRHO14718 337 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 RRASP10301 218 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 FAUP35544 74 aaKnown RBP17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 RPS16P62249 146 aaKnown RBP17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 OR2B11Q5JQS5 317 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 OR4C16Q8NGL9 310 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 WIPF2Q8TF74 440 aaPredicted RBP17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 TCTEX1D2Q8WW35 142 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 HSPB9Q9BQS6 159 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 HRASLSQ9HDD0 168 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 KIAA1456Q9P272 454 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 PRELID3BQ9Y3B1 194 aa17.21■□□□□ 0.35
SLC25A39-201ENST00000225308 LINC01548A6NM66 108 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 PLA2G10O15496 165 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 CRYZL1O95825 349 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 IGLV2-23P01705 113 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 ZNF735P0CB33 412 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 VSIG10L2P0DP72 767 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 MEF2DQ14814 521 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 PSG5Q15238 335 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 HARBI1Q96MB7 349 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 TSNAXQ99598 290 aaKnown RBP17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 FBXL15Q9H469 300 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 TBC1D24Q9ULP9 559 aa17.2■□□□□ 0.34
SLC25A39-201ENST00000225308 FCGR3BO75015 233 aa17.19■□□□□ 0.34
SLC25A39-201ENST00000225308 SPDEFO95238 335 aa17.19■□□□□ 0.34
SLC25A39-201ENST00000225308 HLA-DRB1P01911 266 aa17.19■□□□□ 0.34
SLC25A39-201ENST00000225308 CBX3Q13185 183 aa17.19■□□□□ 0.34
SLC25A39-201ENST00000225308 SLC35E3Q7Z769 313 aa17.19■□□□□ 0.34
SLC25A39-201ENST00000225308 C7orf50Q9BRJ6 194 aaKnown RBP17.19■□□□□ 0.34
SLC25A39-201ENST00000225308 SRRM4A7MD48 611 aaKnown RBP17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 CENPXA8MT69 81 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 LGALS7P47929 136 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 UCP3P55916 312 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 CITED1Q99966 193 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 MCUBQ9NWR8 336 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 GPR31O00270 319 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 SHOXO15266 292 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 LYRM1O43325 122 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 SLC25A17O43808 307 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 DEFA1P59665 94 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 DEFA3P59666 94 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 ASAH1Q13510 395 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 OSR1Q8TAX0 266 aaPredicted RBP17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 MRGPRFQ96AM1 343 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 NOL4LQ96MY1 436 aaPredicted RBP17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 RSRP1Q9BUV0 290 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 TPSG1Q9NRR2 321 aa17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 METTL1Q9UBP6 276 aaKnown RBP17.18■□□□□ 0.34
SLC25A39-201ENST00000225308 NAP1L6A6NFF2 107 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 DISC1C4P0D8 188 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 RAMP3O60896 148 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 RLN1P04808 185 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 CATR1Q13166 79 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 SCGB2B2Q4G0G5 96 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 LIN54Q6MZP7 749 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 LPCAT3Q6P1A2 487 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 SHISA2Q6UWI4 295 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 CMTM1Q8IZ96 169 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 OR51H1Q8NH63 302 aa17.17■□□□□ 0.34
SLC25A39-201ENST00000225308 OR4S2Q8NH73 311 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms