RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 LRTM2Q8N967 370 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 OR52B4Q8NGK2 314 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 ZNF431Q8TF32 576 aaPredicted RBP11.28□□□□□ -0.6
SEC61B-201ENST00000223641 MITD1Q8WV92 249 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 SEC22CQ9BRL7 303 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 GSX1Q9H4S2 264 aaPredicted RBP11.28□□□□□ -0.6
SEC61B-201ENST00000223641 WASHC3Q9Y3C0 194 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 FAM96BQ9Y3D0 163 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 NAV3Q8IVL0 2385 aa11.27□□□□□ -0.6
SEC61B-201ENST00000223641 A0A0A6YYJ9 748 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 A0A0B4J2A0 478 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 VENTXO95231 258 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 HPRT1P00492 218 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 APOA2P02652 100 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 IGKV1-16P04430 117 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 ANXA3P12429 323 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 VAMP1P23763 118 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 BRS3P32247 399 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 RAB13P51153 203 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 ARHGDIBP52566 201 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 RTL8BQ17RB0 113 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 DEFB112Q30KQ8 113 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 ANKRD55Q3KP44 614 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 OR4S2Q8NH73 311 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 LHFPL5Q8TAF8 219 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 IL22RA2Q969J5 263 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 ZNF48Q96MX3 618 aaPredicted RBP11.27□□□□□ -0.61
SEC61B-201ENST00000223641 RNF5Q99942 180 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 PLEKHA2Q9HB19 425 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 SHPKQ9UHJ6 478 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 CDC42EP3Q9UKI2 254 aa11.27□□□□□ -0.61
SEC61B-201ENST00000223641 IGHV3-72A0A0B4J1Y9 119 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 DBX1A6NMT0 343 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 LPAR6P43657 344 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 SLC9A3R2Q15599 337 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 OR2B11Q5JQS5 317 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 CADM3Q8N126 398 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 Q8N6K4 173 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 OR4C13Q8NGP0 309 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
SEC61B-201ENST00000223641 C22orf15Q8WYQ4 148 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 RBMXL1Q96E39 390 aaKnown RBP11.26□□□□□ -0.61
SEC61B-201ENST00000223641 GPN1Q9HCN4 374 aaPredicted RBP11.26□□□□□ -0.61
SEC61B-201ENST00000223641 COMMD9Q9P000 198 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 ALG5Q9Y673 324 aa11.26□□□□□ -0.61
SEC61B-201ENST00000223641 SONP18583 2426 aaKnown RBP11.26□□□□□ -0.61
SEC61B-201ENST00000223641 HIVEP2P31629 2446 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 MDFIC2A0A1B0GVS7 189 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 H7C2Y5 167 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 CREBL2O60519 120 aaPredicted RBP11.25□□□□□ -0.61
SEC61B-201ENST00000223641 CRYZL1O95825 349 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 SERPINE2P07093 398 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 SNRNP70P08621 437 aaKnown RBP11.25□□□□□ -0.61
SEC61B-201ENST00000223641 SRP14P37108 136 aaKnown RBP11.25□□□□□ -0.61
SEC61B-201ENST00000223641 SRPXP78539 464 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 LRRC75BQ2VPJ9 315 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 FBLN7Q53RD9 439 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 Q6YL49 198 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 SELENOHQ8IZQ5 122 aaKnown RBP11.25□□□□□ -0.61
SEC61B-201ENST00000223641 LGI3Q8N145 548 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 RBPMSQ93062 196 aaKnown RBP11.25□□□□□ -0.61
SEC61B-201ENST00000223641 FLYWCH2Q96CP2 140 aaKnown RBP11.25□□□□□ -0.61
SEC61B-201ENST00000223641 EAF1Q96JC9 268 aaPredicted RBP11.25□□□□□ -0.61
SEC61B-201ENST00000223641 RITA1Q96K30 269 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 SSX3Q99909 188 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 PRR13Q9NZ81 148 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 F8P00451 2351 aa11.25□□□□□ -0.61
SEC61B-201ENST00000223641 PIGBOS1A0A0B4J2F0 54 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 DUXBA0A1W2PPF3 345 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 SRRM4A7MD48 611 aaKnown RBP11.24□□□□□ -0.61
SEC61B-201ENST00000223641 S1PR2O95136 353 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 MOSP00540 346 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 IGKV1D-33P01593 117 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 IGKV1-33P01594 117 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 IL6RP08887 468 aaPredicted RBP11.24□□□□□ -0.61
SEC61B-201ENST00000223641 P0C879 139 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 FAM106CPP0CH98 169 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 CD24P25063 80 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 IER3P46695 156 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 LGALS7P47929 136 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 C12orf45Q8N5I9 185 aaPredicted RBP11.24□□□□□ -0.61
SEC61B-201ENST00000223641 OR2T10Q8NGZ9 312 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 COQ8AQ8NI60 647 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 CASTOR1Q8WTX7 329 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 SEC22AQ96IW7 307 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 PHB2Q99623 299 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 OR51J1Q9H342 316 aa11.24□□□□□ -0.61
SEC61B-201ENST00000223641 NSD1Q96L73 2696 aaPredicted RBP11.24□□□□□ -0.61
SEC61B-201ENST00000223641 INAFM1C9JVW0 142 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 HRASP01112 189 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 IGLV2-23P01705 113 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 NQO2P16083 231 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 HLA-GP17693 338 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 CBX3Q13185 183 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms