RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Aldh3a2P47740 484 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Lhfpl5Q4KL25 219 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Btn1a1Q62556 524 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Hand1Q64279 216 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fn3krpQ8K274 309 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Vmn1r229Q8R2A9 306 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr401Q8VFX6 315 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1230Q8VG58 305 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Abhd12Q99LR1 398 aaKnown RBP13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Cisd2Q9CQB5 135 aaKnown RBP13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ntn3Q9R1A3 580 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Zfp69A2A761 587 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm21863J3KMP8 111 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gng3P63216 75 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 McidasQ3UZ45 379 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 1700057G04RikQ3V0U0 232 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Kiaa1456Q80WQ4 447 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Rbm39Q8VH51 530 aaKnown RBP13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Plekhf2Q91WB4 249 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tlnrd1Q9ERE8 362 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ighv7-1A0A075B5S2 121 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Rasl12Q08AT1 266 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Rtn4rl2Q7M6Z0 420 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1225Q7TR01 311 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Coq3Q8BMS4 370 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fam234aQ8C0Z1 555 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr339Q8VGK8 309 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr957Q9EQB7 311 aa13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Eif2s3xQ9Z0N1 472 aaKnown RBP13.53□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fcgr4A0A0B4J1G0 249 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Foxa2P35583 459 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Anxa7Q07076 463 aaKnown RBP13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tacstd2Q8BGV3 317 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gpr84Q8CIM5 396 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Stac2Q8R1B0 408 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tomm40lQ9CZR3 308 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Sun5Q9DA32 373 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Prss22Q9ER10 306 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ap4m1Q9JKC7 449 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 St6galnac5Q9QYJ1 336 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Zfhx3Q61329 3726 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ifna1P01572 189 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ccdc36Q6PDM4 574 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Upk3bQ80YF6 275 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Pttg1ipQ8R143 174 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1132Q8VG97 308 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 9530002B09RikQ9EPV7 135 aa13.52□□□□□ -0.24
Trim39-203ENSMUST00000113706 AtrxQ61687 2476 aaKnown RBP13.52□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr571E9Q407 322 aa13.52□□□□□ -0.25
Trim39-203ENSMUST00000113706 Kcnk3O35111 409 aa13.52□□□□□ -0.25
Trim39-203ENSMUST00000113706 GzmbP04187 247 aa13.52□□□□□ -0.25
Trim39-203ENSMUST00000113706 Sult4a1P63046 284 aa13.52□□□□□ -0.25
Trim39-203ENSMUST00000113706 PnlipQ6P8U6 465 aa13.52□□□□□ -0.25
Trim39-203ENSMUST00000113706 Dtx3Q80V91 347 aa13.52□□□□□ -0.25
Trim39-203ENSMUST00000113706 Zfp729bQ80VN4 1045 aa13.52□□□□□ -0.25
Trim39-203ENSMUST00000113706 Snx18Q91ZR2 614 aa13.52□□□□□ -0.25
Trim39-203ENSMUST00000113706 Igkv1-135A0A0B4J1H7 120 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 BaxQ07813 192 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 GcdhQ60759 438 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 SrrdQ8K2M3 249 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Snapc5Q8R2K7 98 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr50Q8VGK5 312 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr1270Q8VGP3 304 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Sfxn3Q91V61 321 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Lysmd2Q9D7V2 215 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Wdr31Q9JHB4 367 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Clec6aQ9JKF4 209 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Cav2Q9WVC3 162 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Angpt4Q9WVH6 509 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm5493S4R2D1 92 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr1179A2AUS6 307 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm11756A2BEJ1 356 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr1335B2RVY8 335 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Npffr1E9Q468 432 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr417F8VQB1 309 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Cd46O88174 365 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 P04946 108 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Htr5aP30966 357 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 RorcP51450 516 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Spred3Q6P6N5 408 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 NracQ8BNX7 165 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Inpp5kQ8C5L6 468 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr135Q8VEY4 312 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm9817Q9D2M0 144 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Obp2bA2BHR0 176 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Cdc20bD3Z3I0 519 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr905L7N1X5 310 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Nup62Q63850 526 aa13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 RbmxQ9WV02 391 aaKnown RBP13.51□□□□□ -0.25
Trim39-203ENSMUST00000113706 Ighv5-4A0A075B5P9 117 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm21497A0A087WRK3 222 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm7697A0A0J9YUH2 350 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm9495A0A0J9YUZ3 350 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Trav12-1A0N8R1 115 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr267A2AM35 313 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Glp1rO35659 463 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Cd200O54901 278 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 P01804 111 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Pax8Q00288 457 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Slc38a11Q3USY0 453 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms