RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Hist1h1bP43276 223 aaKnown RBP12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Fgf13P70377 245 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Rnf224Q3UIW8 156 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Rtn4rl1Q8K0S5 445 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Cd177Q8R2S8 817 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Nit1Q8VDK1 323 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Olfr1009Q8VFK1 314 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 1700020A23RikQ9DA59 131 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 FAM186AQ9D9R9 1790 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Irs3O54718 495 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 ErhP84089 104 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 ParlQ5XJY4 377 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Slc46a1Q6PEM8 459 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Vma21Q78T54 101 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Igsf21Q7TNR6 468 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Adam33Q923W9 797 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Rcl1Q9JJT0 373 aaKnown RBP12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 R3hdmlA2A5I3 253 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Ascl4M0QW46 144 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Hoxa5P09021 270 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Serf2P84102 59 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Ankrd10Q99LW0 415 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Fam162bQ9CX19 157 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Dph7Q9CYU6 477 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Dda1Q9D9Z5 102 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Q9DAE7 121 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Clec1bQ9JL99 229 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Mnx1Q9QZW9 404 aa12.98□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Gm4787B2RUD9 748 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Nat8f4G5E8L3 226 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Wnt2bO70283 389 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 P01679 107 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Gm11492Q5ND19 536 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Il31Q6EAL8 163 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Tmem167bQ80X45 74 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Olfr1138Q8VFQ9 311 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Tex101Q9JMI7 250 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Suclg1Q9WUM5 346 aaKnown RBP12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Adamtsl5D3Z689 485 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Olfr715bE9Q725 315 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Q3U6N9 222 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 CybaQ61462 192 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 GcsamQ6RFH4 181 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Iglon5Q8HW98 336 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Pnpla3Q91WW7 413 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 5530401A14RikQ9D3H9 131 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Baz2bA2AUY4 2123 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 MiipA2A7Y5 387 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 2010106E10RikA2ANY3 279 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Tmem215A7E1Z1 235 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Gm8882E9Q7E4 283 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Bmpr1bP36898 502 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Clec12bQ149M0 275 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 LiphQ8CIV3 451 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Mfsd4b1Q8VCV9 425 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 PpifQ99KR7 206 aaKnown RBP12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Plin4O88492 1403 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Gm20767O70517 169 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Ccl22O88430 92 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Lrfn4Q80XU8 636 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Olfr960Q8VET5 316 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Olfr492Q8VFD1 314 aa12.97□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Gm20918J3QN17 227 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 mt-Co3P00416 261 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Fcgr1P26151 404 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Zfp386Q1WWJ5 626 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Ifna13Q80SU4 189 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 BC049730Q810N3 246 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Flrt3Q8BGT1 649 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 MturnQ8CGA4 131 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 AfmidQ8K4H1 305 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Vmn1r47Q9EQ51 310 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Tbx21Q9JKD8 530 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Gm10799F7C7U2 104 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Mtnd6P03925 172 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Pcgf2P23798 342 aaKnown RBP12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Gcnt2P97402 401 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Tmem251Q8BH26 163 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 B3gnt8Q8R3I9 389 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Olfr536Q8VFE9 307 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Olfr1448Q8VFX1 314 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 A0A286YCH8 300 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Defa35E9QLQ1 93 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Cldn1O88551 211 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 SftpcP21841 193 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Defa6P50704 93 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Fam160a2Q3U2I3 975 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 PmelQ60696 626 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Fbxo22Q78JE5 402 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Olfr851Q7TRG0 312 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Trmt61aQ80XC2 290 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 1700034E13RikQ9D2T6 108 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Ldb3Q9JKS4 723 aaKnown RBP12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 Trip11E9Q512 1976 aa12.96□□□□□ -0.33
Pcdha1-201ENSMUST00000070797 A0A286YDM5 308 aa12.96□□□□□ -0.34
Pcdha1-201ENSMUST00000070797 Rhox7bA6PW38 321 aa12.96□□□□□ -0.34
Pcdha1-201ENSMUST00000070797 Slc38a11Q3USY0 453 aa12.96□□□□□ -0.34
Pcdha1-201ENSMUST00000070797 Olfr1173Q7TR24 312 aa12.96□□□□□ -0.34
Pcdha1-201ENSMUST00000070797 Glipr1Q9CWG1 255 aa12.96□□□□□ -0.34
Pcdha1-201ENSMUST00000070797 Fam241aQ9CZL2 131 aa12.96□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms