RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Stpg4Q9DAG5 247 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Scgb1b12A0A087WP21 93 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Trbv5A0A0B4J1G9 113 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Fndc10A2A9Q0 223 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Slc6a9P28571 692 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Nkain3Q3URJ8 181 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr328Q5NCD3 310 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Trav8d-1Q5R1H8 112 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr782Q7TRI2 314 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 AtcayQ8BHE3 372 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Scrt2Q8BTH6 311 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Neurl1Q923S6 574 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Sgms2Q9D4B1 365 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Arr3Q9EQP6 381 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Nova1Q9JKN6 507 aaKnown RBP12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ndrg2Q9QYG0 371 aaKnown RBP12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rnd2Q9QYM5 227 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Syt7Q9R0N7 403 aa12.83□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Cdh23Q99PF4 3354 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm13090A2A899 111 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Slc25a53A2AF28 346 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Ear14F6YUX7 155 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm5108J3QP01 101 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rnase2O35291 155 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Fkbp8O35465 402 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Chrna7P49582 502 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Ccr1l1P51676 356 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tmprss9P69525 1065 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mbd3l2Q3UXB0 228 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Zfp975Q6NVD6 525 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mob3aQ8BSU7 217 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr112Q8C0S2 320 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Osbpl11Q8CI95 751 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Iglon5Q8HW98 336 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr1459Q8VFV9 307 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr502Q8VG09 314 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Dnaja3Q99M87 480 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Lysmd1Q9D0E3 226 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mrpl21Q9D1N9 209 aaKnown RBP12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Efcab10Q9D581 132 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Pus1Q9WU56 423 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Wdr90Q6ZPG2 1874 aa12.83□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm37797A0A1D5RLC8 261 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr556E9Q549 324 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 IfnabL7MTU6 190 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Zfp729aQ4QQP3 973 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Dll1Q61483 722 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm13199Q8C8E0 125 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr446Q8VEV0 308 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Nkx6-1Q99MA9 365 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Phf19Q9CXG9 578 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 PifoQ9D9W1 207 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Cbln3Q9JHG0 197 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm15440D3Z3P4 90 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm10638F6QEG2 257 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Chek1O35280 476 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Sc5dO88822 299 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Ca3P16015 260 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gpm6aP35802 278 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rpl29P47915 160 aaKnown RBP12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Osgin2Q3TEE9 550 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 UevldQ3U1V6 471 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Slc22a14Q497L9 629 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Znf664Q4VA44 261 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr504Q7TRU7 318 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Fbll1Q80WS3 314 aaKnown RBP12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 9930022D16RikQ8BG27 128 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 5930422O12RikQ8C4Y4 123 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr181Q8VGQ7 317 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Wasf3Q8VHI6 501 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Cldn23Q9D7D7 296 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 RprmQ9JJ72 109 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gabrg1Q9R0Y8 465 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Bcl2l10Q9Z0F3 191 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rspo1Q9Z132 265 aa12.82□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gpr27O54897 379 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 H3f3cP02301 136 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Lyz2P08905 148 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Wipf3P0C7L0 485 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Hsf1P38532 525 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 UbdP63072 162 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 H3f3aP84244 136 aaKnown RBP12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Isoc2aP85094 206 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Oas1bQ60856 376 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rasl2-9Q61820 216 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Arl11Q6P3A9 176 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Pramel5Q7TPY4 500 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr921Q7TRC0 313 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Spem2Q8C5U4 503 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Uqcc3Q8K2T4 89 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tubg2Q8VCK3 451 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Nxph3Q91VX5 252 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Shisal2bQ9D1Y9 158 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tmem239Q9DA47 151 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Hsd17b6Q9R092 317 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 AgrnA2ASQ1 1950 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Trip12G5E870 2025 aaKnown RBP12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm38303A0A0A6YWW8 100 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Trbv12-1A0A0B4J1H0 124 aa12.81□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr739E9Q1P0 309 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms