RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 DaoP18894 345 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tnfrsf9P20334 256 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 AcheP21836 614 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Sox19Q62249 55 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 MaoaQ64133 526 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Pramel5Q7TPY4 500 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tox3Q80W03 575 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr410Q8VFX7 315 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr402Q8VFX8 315 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr772Q8VGC5 311 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 GhitmQ91VC9 346 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Lap3Q9CPY7 519 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Ctrb1Q9CR35 263 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Syt7Q9R0N7 403 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm6890A2BG94 208 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Cypt3B1AY64 174 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm4950D3YUM8 205 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 BC048679D3YXE9 172 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 9830107B12RikD3Z5D6 160 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr568E9Q554 313 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm6665F6Y363 85 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Slc38a6G3UVW3 457 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm21788J3QNH3 180 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Ly6c1P0CW02 131 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Id4P41139 161 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Rras2P62071 204 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Ufd1P70362 307 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Snai2P97469 269 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Masp1P98064 704 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Cbx5Q61686 191 aaKnown RBP7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Cdkl3Q8BLF2 595 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Vash1Q8C1W1 375 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Ms4a4dQ99N05 225 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Med30Q9CQI9 178 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Trappc2Q9CQP2 140 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr789A0A1L1SV77 312 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Ube2dnl1A2AFH1 155 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm1330D3Z460 184 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 C2cd6E9Q152 557 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr746E9Q840 314 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 BC117090L7N257 96 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Bet1lO35153 111 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 MpzP27573 248 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Pla2g2aP31482 146 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tas2r41P59532 308 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Btg1P62325 171 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 ArsgQ3TYD4 525 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 BC147527Q3V185 167 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Ifna15Q61718 190 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Zfp677Q6PEP4 634 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr1219Q7TR04 311 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr453Q7TRV7 317 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr281Q8VET6 311 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr50Q8VGK5 312 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 MynnQ99MD8 610 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Actr6Q9D864 396 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Crim1Q9JLL0 1037 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Six6Q9QZ28 246 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Fam208bQ5DTT3 2382 aa7.35□□□□□ -1.23
Trim39-201ENSMUST00000042717 Arxes1C0HK79 180 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Arxes2C0HK80 180 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm43720E0CXM8 267 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 SdcbpO08992 299 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 PspnO70300 156 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 SellP18337 372 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Cdkn1bP46414 197 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Defa14P50712 85 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Pip4p1Q3TWL2 284 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm10645Q3UPY1 145 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Flrt1Q6RKD8 674 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Wdyhv1Q80WB5 209 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Actrt3Q8BXF8 369 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Esco2Q8CIB9 592 aaKnown RBP7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tctn3Q8R2Q6 595 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Znf281Q99LI5 893 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tprg1lQ9DBS2 266 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr961Q9EQ84 314 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Psma1Q9R1P4 263 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr418A0A140T8J6 310 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm21767J3QPV5 180 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Mup3P04939 184 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tacr3P47937 452 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Sult4a1P63046 284 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Trav6d-4Q5R1I0 115 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Bloc1s3Q5U5M8 195 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 HaaoQ78JT3 286 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Kctd9Q80UN1 339 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tmem11Q8BK08 190 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 DapQ91XC8 102 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 1700029P11RikQ9CQ68 150 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Dph7Q9CYU6 477 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Ing5Q9D8Y8 240 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Foxj2Q9ES18 565 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Cx3cr1Q9Z0D9 354 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 TpbgQ9Z0L0 426 aa7.34□□□□□ -1.23
Trim39-201ENSMUST00000042717 Sirpb1bA0A0A6YXN8 397 aa7.33□□□□□ -1.24
Trim39-201ENSMUST00000042717 4930402F06RikA2AUQ8 332 aa7.33□□□□□ -1.24
Trim39-201ENSMUST00000042717 Vmn1r124D3YTX4 307 aa7.33□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1471F6QVZ8 314 aa7.33□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm21797J3QNW5 180 aa7.33□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms