RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 FAM90A26D6RGX4 464 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 HAND1O96004 215 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 RAB4AP20338 218 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 TFF3Q07654 80 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 AESQ08117 197 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 PSG7Q13046 419 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 EIF4EBP1Q13541 118 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-233ENST00000642021 SLC10A1Q14973 349 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 TMEM241Q24JQ0 296 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 TBC1D28Q2M2D7 210 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 CYP2G1PQ6ZSU1 146 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 C1orf210Q8IVY1 113 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 Q8IYB0 196 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 ZNF645Q8N7E2 425 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 DDA1Q9BW61 102 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 CTDSP1Q9GZU7 261 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 SPRR3Q9UBC9 169 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 LRRC30A6NM36 301 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 IFNA1P01562 189 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 PMS2P11Q13670 270 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 UNQ6494/PRO21346Q6UXR6 183 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 OR10A7Q8NGE5 316 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 PACRGQ96M98 296 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-233ENST00000642021 ELOVL1Q9BW60 279 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 ABI3Q9P2A4 366 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 WASF3Q9UPY6 502 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 KBTBD11O94819 623 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 HOXC12P31275 282 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 PMP22Q01453 160 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 BSXQ3C1V8 233 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 TPRX1Q8N7U7 411 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 OR10G9Q8NGN4 311 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 OR10G7Q8NGN6 311 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 PARLQ9H300 379 aa11.59□□□□□ -0.55
PHGDH-233ENST00000642021 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-233ENST00000642021 MPV17P39210 176 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 COL10A1Q03692 680 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 OR51G1Q8NGK1 321 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 NANOS1Q8WY41 292 aaKnown RBP11.58□□□□□ -0.56
PHGDH-233ENST00000642021 GALMQ96C23 342 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 AGMATQ9BSE5 352 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 GAB2Q9UQC2 676 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 TIMM9Q9Y5J7 89 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 HBZP02008 142 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 FGF7P21781 194 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 ATP1A1-AS1Q5TC04 95 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 CFAP161Q6P656 301 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 C11orf53Q8IXP5 236 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 MDS2Q8NDY4 140 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 PYGO2Q9BRQ0 406 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 SRD5A3Q9H8P0 318 aa11.58□□□□□ -0.56
PHGDH-233ENST00000642021 CHTOPQ9Y3Y2 248 aaKnown RBP11.58□□□□□ -0.56
PHGDH-233ENST00000642021 LYZL6O75951 148 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 TUBG1P23258 451 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 IL2RGP31785 369 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 REC114Q7Z4M0 266 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 OR4F5Q8NH21 305 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 MRGPRDQ8TDS7 321 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 RAB24Q969Q5 203 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 MISP3Q96FF7 219 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 COQ2Q96H96 371 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 OR4F4Q96R69 305 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 GPR87Q9BY21 358 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 PRO1933Q9H354 126 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-233ENST00000642021 GFOD1Q9NXC2 390 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 KCNIP1Q9NZI2 227 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 LAMP3Q9UQV4 416 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 IGHV3-43A0A0B4J1X8 118 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 CTXND1A0A1B0GTU2 59 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 RNF212BA8MTL3 300 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 MLNRO43193 412 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 IGHV3-43DP0DP04 118 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 IGHV1-2P23083 117 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 NPPCP23582 126 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 PSMB3P49720 205 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 FFAR4Q5NUL3 377 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 GCNT2Q8N0V5 402 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 S100PBPQ96BU1 408 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 TMEM147Q9BVK8 224 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 MRPL37Q9BZE1 423 aaKnown RBP11.57□□□□□ -0.56
PHGDH-233ENST00000642021 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 PITPNC1Q9UKF7 332 aa11.57□□□□□ -0.56
PHGDH-233ENST00000642021 TMEM30CPA0ZSE6 113 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 LINC00473A8K010 186 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 TGOLN2O43493 480 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 PAGE4O60829 102 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 PRSS8Q16651 343 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 RFESDQ8TAC1 157 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 PCGF1Q9BSM1 259 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 NPCDR1Q9BY65 106 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 HES4Q9HCC6 221 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 DEFB108AA8MXU0 73 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 C1QTNF9BB2RNN3 333 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 KLRC4-KLRK1H3BQV0 150 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 WISP2O76076 250 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 SSTR5P35346 364 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 GALR1P47211 349 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 MSMO1Q15800 293 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms