RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	CISD1	Q9NZ45	108 aa	Known RBP	14.05	□□□□□ -0.16
PHGDH-223	ENST00000641597	GALR2	O43603	387 aa	Predicted RBP	14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	IGKV3-15	P01624	115 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597		P0C879	139 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	EIF2S3	P41091	472 aa	Known RBP	14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	CD81	P60033	236 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	TMEM41B	Q5BJD5	291 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	GCSAML	Q5JQS6	135 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	WDR25	Q64LD2	544 aa	Predicted RBP	14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	SLC35E3	Q7Z769	313 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	ZNF610	Q8N9Z0	462 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	MBD3L1	Q8WWY6	194 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	RPUSD4	Q96CM3	377 aa	Known RBP	14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	HSPB7	Q9UBY9	170 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	ZNF292	O60281	2723 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	C1QTNF9B	B2RNN3	333 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	ZNF737	O75373	536 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	S100A8	P05109	93 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	DPPA3	Q6W0C5	159 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	EDARADD	Q8WWZ3	215 aa		14.04	□□□□□ -0.16
PHGDH-223	ENST00000641597	PCNX1	Q96RV3	2341 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	WNT2	P09544	360 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	RTP5	Q14D33	572 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	FAM201A	Q5SY85	155 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	NCR3LG1	Q68D85	454 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	INO80C	Q6PI98	192 aa	Predicted RBP	14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	DEFB124	Q8NES8	71 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	ABHD5	Q8WTS1	349 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	NINJ1	Q92982	152 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	LEAP2	Q969E1	77 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	PSMG3	Q9BT73	122 aa	Predicted RBP	14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	SLC39A9	Q9NUM3	307 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	DUSP13	Q9UII6	198 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	ANKRD11	Q6UB99	2663 aa	Predicted RBP	14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597		A0A087WWC5	75 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	PMS2P5	A8MQ11	134 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	GUSBP1	Q15486	140 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	C1QL4	Q86Z23	238 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	OR2Z1	Q8NG97	314 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	LRRC29	Q8WV35	223 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	FRZB	Q92765	325 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	ZNF251	Q9BRH9	671 aa		14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	TET2	Q6N021	2002 aa	Predicted RBP	14.03	□□□□□ -0.16
PHGDH-223	ENST00000641597	OOEP	A6NGQ2	149 aa		14.02	□□□□□ -0.16
PHGDH-223	ENST00000641597	SOD3	P08294	240 aa		14.02	□□□□□ -0.16
PHGDH-223	ENST00000641597	SELL	P14151	372 aa		14.02	□□□□□ -0.16
PHGDH-223	ENST00000641597	FGF7	P21781	194 aa		14.02	□□□□□ -0.16
PHGDH-223	ENST00000641597	RPRML	Q8N4K4	120 aa		14.02	□□□□□ -0.16
PHGDH-223	ENST00000641597	DTD1	Q8TEA8	209 aa		14.02	□□□□□ -0.16
PHGDH-223	ENST00000641597	HIPK2	Q9H2X6	1198 aa		14.02	□□□□□ -0.16
PHGDH-223	ENST00000641597	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	14.02	□□□□□ -0.16
PHGDH-223	ENST00000641597	ARFGEF3	Q5TH69	2177 aa		14.02	□□□□□ -0.17
PHGDH-223	ENST00000641597	HOXC12	P31275	282 aa		14.02	□□□□□ -0.17
PHGDH-223	ENST00000641597	ADIRF	Q15847	76 aa		14.02	□□□□□ -0.17
PHGDH-223	ENST00000641597	AGMAT	Q9BSE5	352 aa		14.02	□□□□□ -0.17
PHGDH-223	ENST00000641597	GGACT	Q9BVM4	153 aa		14.02	□□□□□ -0.17
PHGDH-223	ENST00000641597	QTRT1	Q9BXR0	403 aa	Known RBP	14.02	□□□□□ -0.17
PHGDH-223	ENST00000641597	GPR61	Q9BZJ8	451 aa		14.02	□□□□□ -0.17
PHGDH-223	ENST00000641597	SDF2L1	Q9HCN8	221 aa		14.02	□□□□□ -0.17
PHGDH-223	ENST00000641597	IGHV1-18	A0A0C4DH31	117 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	OR9G9	P0C7N8	305 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	PYY3	Q5JQD4	70 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	SLC35E4	Q6ICL7	350 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	ZNRF1	Q8ND25	227 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	VAX2	Q9UIW0	290 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	TRAV20	A0A0B4J274	112 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	TMEM210	A6NLX4	147 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	HOXA5	P20719	270 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	SERF2	P84101	59 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	RPL39P5	Q59GN2	51 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	VHLL	Q6RSH7	139 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	C1orf229	Q6ZS94	237 aa	Predicted RBP	14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	H2BFWT	Q7Z2G1	175 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	SNIP1	Q8TAD8	396 aa	Known RBP	14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	FAM210B	Q96KR6	192 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	TAAR6	Q96RI8	345 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	CXXC4	Q9H2H0	198 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	DSCAM	O60469	2012 aa		14.01	□□□□□ -0.17
PHGDH-223	ENST00000641597	IGHV2OR16-5	A0A0B4J2B6	119 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	MARCH11	A6NNE9	402 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	IGHG3	P01860	377 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	FFAR4	Q5NUL3	377 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	FIP1L1	Q6UN15	594 aa	Known RBP	14	□□□□□ -0.17
PHGDH-223	ENST00000641597	OR5T1	Q8NG75	326 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597		Q8TCH9	128 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	SMIM7	Q9BQ49	75 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	ELOVL1	Q9BW60	279 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	TNC	P24821	2201 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	TRAV3	A0A0B4J244	114 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	RNF212B	A8MTL3	300 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	TRGC1	P0CF51	173 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	ZNF134	P52741	427 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	DUX4L9	Q6RFH8	374 aa	Predicted RBP	14	□□□□□ -0.17
PHGDH-223	ENST00000641597	OR10G4	Q8NGN3	311 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	OR10G9	Q8NGN4	311 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	OR10G7	Q8NGN6	311 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	TOLLIP	Q9H0E2	274 aa		14	□□□□□ -0.17
PHGDH-223	ENST00000641597	DKK4	Q9UBT3	224 aa		14	□□□□□ -0.17

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