RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 IZUMO2Q6UXV1 221 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 ZNF562Q6V9R5 426 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 OR4A4PQ8NGN8 299 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 RAB3CQ96E17 227 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 TSNAXQ99598 290 aaKnown RBP10.75□□□□□ -0.69
LINC00339-211ENST00000641009 ASCL2Q99929 193 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 RAB22AQ9UL26 194 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 BET1O15155 118 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 FABP7O15540 132 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 SLC25A17O43808 307 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 SAP30O75446 220 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 SPDEFO95238 335 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 APOA2P02652 100 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 FCGR3AP08637 254 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 GNB3P16520 340 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 PSMD7P51665 324 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 TPPP2P59282 170 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 MRPS15P82914 257 aaKnown RBP10.74□□□□□ -0.69
LINC00339-211ENST00000641009 PYHIN1Q6K0P9 492 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 ZNF367Q7RTV3 350 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 ZNF429Q86V71 674 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 PDPNQ86YL7 162 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 MAFIPQ8WZ33 124 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 ARPC1AQ92747 370 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 SLC35D1Q9NTN3 355 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 U3KQK5 164 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 DNAH7Q8WXX0 4024 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 A0A075B6Q4 140 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 A0A0B4J203 849 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 ARPC1BO15143 372 aaKnown RBP10.74□□□□□ -0.69
LINC00339-211ENST00000641009 OR8U9P0C7N5 309 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 GSTT2P0CG29 244 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 GSTT2BP0CG30 244 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 SERPINB10P48595 397 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-211ENST00000641009 OR10R2Q8NGX6 335 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 GRPEL2Q8TAA5 225 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 FLYWCH2Q96CP2 140 aaKnown RBP10.74□□□□□ -0.69
LINC00339-211ENST00000641009 OR2D2Q9H210 308 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 VCX3BQ9H321 246 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 SDHAF2Q9NX18 166 aa10.74□□□□□ -0.69
LINC00339-211ENST00000641009 ZNF230Q9UIE0 474 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-211ENST00000641009 TRAV1-2A0A0B4J238 106 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 IFITM5A6NNB3 132 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 MFNGO00587 321 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 PDCD5O14737 125 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 TRGV3P03979 118 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 MYL9P24844 172 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 RANBP1P43487 201 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 SSBP2P81877 361 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-211ENST00000641009 PJVKQ0ZLH3 352 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 FXYD3Q14802 87 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 OR10J5Q8NHC4 309 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 C5orf30Q96GV9 206 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 CABLES2Q9BTV7 478 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 NDUFB11Q9NX14 153 aa10.73□□□□□ -0.69
LINC00339-211ENST00000641009 TRBV6-7A0A0A0MS04 114 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 RAB27BO00194 218 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 IGLV2-23P01705 113 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 HSPB1P04792 205 aaKnown RBP10.72□□□□□ -0.69
LINC00339-211ENST00000641009 SPNP16150 400 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 HIST1H1DP16402 221 aaKnown RBP10.72□□□□□ -0.69
LINC00339-211ENST00000641009 RAB3BP20337 219 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 GADD45AP24522 165 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 CD40LGP29965 261 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 HSPA13P48723 471 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 ACSM6Q6P461 480 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 NR2C2APQ86WQ0 139 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 RHOVQ96L33 236 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 SLA2Q9H6Q3 261 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 ZNF355PQ9NSJ1 428 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 BLOC1S6Q9UL45 172 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 SMAD5-AS1Q9Y6J3 95 aa10.72□□□□□ -0.69
LINC00339-211ENST00000641009 SMIM30A4D0T7 59 aa10.71□□□□□ -0.69
LINC00339-211ENST00000641009 CNIH1O95406 144 aa10.71□□□□□ -0.69
LINC00339-211ENST00000641009 RAB6AP20340 208 aa10.71□□□□□ -0.69
LINC00339-211ENST00000641009 C22orf42Q6IC83 251 aa10.71□□□□□ -0.69
LINC00339-211ENST00000641009 OR5T1Q8NG75 326 aa10.71□□□□□ -0.69
LINC00339-211ENST00000641009 HARBI1Q96MB7 349 aa10.71□□□□□ -0.69
LINC00339-211ENST00000641009 ELF5Q9UKW6 265 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-211ENST00000641009 IGKV1D-8A0A087WSZ0 117 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 TRDV1A0A1B0GX56 115 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 CRYGBP07316 175 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 GP9P14770 177 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 PITPNAQ00169 270 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 ARFRP1Q13795 201 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 HAPLN4Q86UW8 402 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 POC5Q8NA72 575 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 BVESQ8NE79 360 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 GINS4Q9BRT9 223 aa10.7□□□□□ -0.7
LINC00339-211ENST00000641009 RBM7Q9Y580 266 aaKnown RBP10.7□□□□□ -0.7
LINC00339-211ENST00000641009 SRRM4A7MD48 611 aaKnown RBP10.69□□□□□ -0.7
LINC00339-211ENST00000641009 SHOXO15266 292 aa10.69□□□□□ -0.7
LINC00339-211ENST00000641009 DIRAS3O95661 229 aa10.69□□□□□ -0.7
LINC00339-211ENST00000641009 TALDO1P37837 337 aa10.69□□□□□ -0.7
LINC00339-211ENST00000641009 LGALS7P47929 136 aa10.69□□□□□ -0.7
LINC00339-211ENST00000641009 DEFA5Q01523 94 aa10.69□□□□□ -0.7
LINC00339-211ENST00000641009 OVCH2Q7RTZ1 564 aa10.69□□□□□ -0.7
LINC00339-211ENST00000641009 OR6Q1Q8NGQ2 317 aa10.69□□□□□ -0.7
LINC00339-211ENST00000641009 ATG5Q9H1Y0 275 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms