RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 IFNA4P05014 189 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 SNRNP70P08621 437 aaKnown RBP8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 H2AFB1P0C5Y9 115 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 GRNP28799 593 aaKnown RBP8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 MMP26Q9NRE1 261 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 C19orf12Q9NSK7 152 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 LYRM2Q9NU23 88 aaPredicted RBP8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 MBNL3Q9NUK0 354 aaKnown RBP8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 COA4Q9NYJ1 87 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 OR6C3Q9NZP0 311 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 PKD1L2Q7Z442 2459 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 ZFP92A6NM28 416 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 A8MXK9 166 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 IFNL4K9M1U5 179 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 PLAUP00749 431 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 TUBG1P23258 451 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 FGF8P55075 233 aaPredicted RBP8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 BAXQ07812 192 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 ZNF585BQ52M93 769 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 UBAC2Q8NBM4 344 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 R3HDM4Q96D70 268 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 TLNRD1Q9H1K6 362 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 ZNF665Q9H7R5 613 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 TUBG2Q9NRH3 451 aa8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 PUS1Q9Y606 427 aaKnown RBP eCLIP8.07□□□□□ -1.12
CACNA1A-248ENST00000637774 NKX6-3A6NJ46 265 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 LINC00473A8K010 186 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 ZG16O60844 167 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 CD3EP07766 207 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 CD55P08174 381 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 HOXA1P49639 335 aaPredicted RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 SULT1A2P50226 295 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 UBE2KP61086 200 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 RPL31P62899 125 aaKnown RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 HBG1P69891 147 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 HBG2P69892 147 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 NKX6-1P78426 367 aaPredicted RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 SVBPQ8N300 66 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 NKX6-2Q9C056 277 aaPredicted RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 UQCC1Q9NVA1 299 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 CISD1Q9NZ45 108 aaKnown RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 TRBV6-6A0A0A6YYG2 114 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 SOX15O60248 233 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 LY6HO94772 140 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 ATG12O94817 140 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 SFTA3P0C7M3 94 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 FAM157CP0CG43 387 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 CCL3L1P16619 93 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 CD200P41217 278 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 ID3Q02535 119 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 ADIPOQQ15848 244 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 RAB40CQ96S21 281 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 RPS10P5Q9NQ39 176 aa8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 SLC25A10Q9UBX3 287 aaPredicted RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 SMG1Q96Q15 3661 aaKnown RBP8.06□□□□□ -1.12
CACNA1A-248ENST00000637774 C17orf100A8MU93 164 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 C1QTNF9BB2RNN3 333 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 K7N7A8 449 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 SLC31A2O15432 143 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 GAPDHP04406 335 aaKnown RBP8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 ADH4P08319 380 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 C1QTNF9P0C862 333 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 MRPS11P82912 194 aaKnown RBP8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 UTF1Q5T230 341 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 ZNF880Q6PDB4 577 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 ZNF709Q8N972 641 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 IL19Q9UHD0 177 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 MARCH11A6NNE9 402 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 ENSAO43768 121 aaKnown RBP8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 ZNF737O75373 536 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 TDGF1P3P51864 188 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 RAB2AP61019 212 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 SRSF7Q16629 238 aaKnown RBP eCLIP8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 GUK1Q16774 197 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 CBLN2Q8IUK8 224 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 C1orf174Q8IYL3 243 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 C1orf87Q8N0U7 546 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 HES4Q9HCC6 221 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 ENY2Q9NPA8 101 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 GNG13Q9P2W3 67 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 PLXNB1O43157 2135 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 PPIAL4EA0A075B759 164 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 FAM74A7A6NL05 159 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 PPIAL4DF5H284 164 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 DFFBO76075 338 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 PPIAL4FP0DN26 164 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 LYL1P12980 280 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 SULT1A1P50225 295 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 DLX1P56177 255 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 SLC38A11Q08AI6 406 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 FAM74A3Q4VXF1 159 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 AVPI1Q5T686 147 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 RXFP4Q8TDU9 374 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 DTD1Q8TEA8 209 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 RBKSQ9H477 322 aa8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 STRAPQ9Y3F4 350 aaKnown RBP8.05□□□□□ -1.12
CACNA1A-248ENST00000637774 PPIAL4AQ9Y536 164 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms