RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 FAM166AQ6J272 317 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 SAXO1Q8IYX7 474 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 OR4X1Q8NH49 305 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 HARBI1Q96MB7 349 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 APCSP02743 223 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 SUPT4H1P63272 117 aaKnown RBP13.57□□□□□ -0.24
CLN5-218ENST00000637397 GRIFINA4D1Z8 144 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 COLCA2A8K830 154 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 SYNGR3O43761 229 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 MPDU1O75352 247 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 LYZP61626 148 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 FAM89BQ8N5H3 189 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 OR4F17Q8NGA8 305 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 PSMG3Q9BT73 122 aaPredicted RBP13.57□□□□□ -0.24
CLN5-218ENST00000637397 AAMDCQ9H7C9 122 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 REC114Q7Z4M0 266 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 VSTM2AQ8TAG5 236 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 RNF2Q99496 336 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 PKIBQ9C010 78 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 ZDHHC8Q9ULC8 765 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 LDLRAD4O15165 306 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 NEURL1O76050 574 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 GABRA6Q16445 453 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 TMEM183AQ8IXX5 376 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 HES7Q9BYE0 225 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 WIPI2Q9Y4P8 454 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 NCOR1O75376 2440 aa13.57□□□□□ -0.24
CLN5-218ENST00000637397 MARCH11A6NNE9 402 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 PROB1E7EW31 1015 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 RFPL3SP0C7P2 107 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 RTP5Q14D33 572 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 OR8G5Q8NG78 346 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 ZIC3O60481 467 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 TIPARPQ7Z3E1 657 aaKnown RBP13.56□□□□□ -0.24
CLN5-218ENST00000637397 WDFY1Q8IWB7 410 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 LYZL4Q96KX0 146 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 TMEM191AQ9H0A3 160 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 ROS1P08922 2347 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 ZNF729A6NN14 1252 aaPredicted RBP13.56□□□□□ -0.24
CLN5-218ENST00000637397 TMEM250H0YL14 139 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 CCL20P78556 96 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 TNXAQ16473 311 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 GSX1Q9H4S2 264 aaPredicted RBP13.56□□□□□ -0.24
CLN5-218ENST00000637397 CD5P06127 495 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 COL8A1P27658 744 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 RPEQ96AT9 228 aa13.56□□□□□ -0.24
CLN5-218ENST00000637397 C21orf140B9A014 251 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 TCF21O43680 179 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 P01737 135 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 APELAP0DMC3 54 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 BHLHA15Q7RTS1 189 aaPredicted RBP13.55□□□□□ -0.24
CLN5-218ENST00000637397 RTN4RL2Q86UN3 420 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 CLDND2Q8NHS1 167 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 GMPPAQ96IJ6 420 aaPredicted RBP13.55□□□□□ -0.24
CLN5-218ENST00000637397 SEBOXQ9HB31 216 aaPredicted RBP13.55□□□□□ -0.24
CLN5-218ENST00000637397 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 AUP1Q9Y679 476 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 PHF3Q92576 2039 aaKnown RBP13.55□□□□□ -0.24
CLN5-218ENST00000637397 COL5A1-AS1Q5SY13 56 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 SAP25Q8TEE9 199 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 MRPL18Q9H0U6 180 aaKnown RBP13.55□□□□□ -0.24
CLN5-218ENST00000637397 GOLT1BQ9Y3E0 138 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 EP300Q09472 2414 aaPredicted RBP13.55□□□□□ -0.24
CLN5-218ENST00000637397 ARL14EPLP0DKL9 152 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 KIAA1644Q3SXP7 199 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 C10orf113Q5VZT2 155 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 DNASE2BQ8WZ79 361 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 TXNDC17Q9BRA2 123 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 PLXNA3P51805 1871 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 TRBV6-7A0A0A0MS04 114 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 COX7A1P24310 79 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 FHL1Q13642 323 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 PMS2CLQ68D20 193 aa13.55□□□□□ -0.24
CLN5-218ENST00000637397 RAB29O14966 203 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 REG1BP48304 166 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 TMEM108Q6UXF1 575 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 RNF144BQ7Z419 303 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 WFDC1Q9HC57 220 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 RNF7Q9UBF6 113 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 TEX50A0A1B0GTY4 177 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 ZNF137PP52743 207 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 LBHQ53QV2 105 aaPredicted RBP13.54□□□□□ -0.24
CLN5-218ENST00000637397 ABHD12Q8N2K0 398 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 NFAM1Q8NET5 270 aaPredicted RBP13.54□□□□□ -0.24
CLN5-218ENST00000637397 FLYWCH2Q96CP2 140 aaKnown RBP13.54□□□□□ -0.24
CLN5-218ENST00000637397 MKRN2OSH3BPM6 223 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 MGST3O14880 152 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 GTF2H5Q6ZYL4 71 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 LHFPL1Q86WI0 220 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 QTRT1Q9BXR0 403 aaKnown RBP13.54□□□□□ -0.24
CLN5-218ENST00000637397 TCF20Q9UGU0 1960 aaKnown RBP13.54□□□□□ -0.24
CLN5-218ENST00000637397 AKAP6Q13023 2319 aa13.54□□□□□ -0.24
CLN5-218ENST00000637397 UBE2CO00762 179 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 MPV17P39210 176 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 LINC00469Q8N7U9 141 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 SLX1AQ9BQ83 275 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 A0A087WWC5 75 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 B4E171 279 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 SMPD2O60906 423 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms