RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ZNF355PQ9NSJ1 428 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 IGKV1-6A0A0C4DH72 117 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 TRDV1A0A1B0GX56 115 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 FCN1O00602 326 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 SLC25A17O43808 307 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 SAP30O75446 220 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 CNIH1O95406 144 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 IGKV1-16P04430 117 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 OR8U9P0C7N5 309 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 NHLRC4P0CG21 123 aaPredicted RBP13.91□□□□□ -0.18
PNKP-225ENST00000636214 GNB3P16520 340 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 RAB6AP20340 208 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 OR10A3P58181 314 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 TPPP2P59282 170 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 KIAA0141Q14154 515 aaPredicted RBP13.91□□□□□ -0.18
PNKP-225ENST00000636214 ARL6IP1Q15041 203 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 AKIRIN2Q53H80 203 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 ZNF383Q8NA42 475 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 LFNGQ8NES3 379 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 GRPEL2Q8TAA5 225 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 DCUN1D4Q92564 292 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 CABLES2Q9BTV7 478 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 Q9H521 79 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 SLA2Q9H6Q3 261 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 NUBP2Q9Y5Y2 271 aa13.91□□□□□ -0.18
PNKP-225ENST00000636214 DIRAS3O95661 229 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 HIST1H1DP16402 221 aaKnown RBP13.9□□□□□ -0.18
PNKP-225ENST00000636214 LGALS7P47929 136 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 GABARAPL2P60520 117 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 TAGLNQ01995 201 aaKnown RBP13.9□□□□□ -0.18
PNKP-225ENST00000636214 FXYD3Q14802 87 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 RTL8BQ17RB0 113 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 C22orf42Q6IC83 251 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 CASTOR1Q8WTX7 329 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 HARBI1Q96MB7 349 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 MS4A10Q96PG2 267 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 TOLLIPQ9H0E2 274 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 ALX4Q9H161 411 aaPredicted RBP13.9□□□□□ -0.18
PNKP-225ENST00000636214 SCOCQ9UIL1 159 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 GAB2Q9UQC2 676 aa13.9□□□□□ -0.18
PNKP-225ENST00000636214 SOX15O60248 233 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 MRPS14O60783 128 aaKnown RBP13.89□□□□□ -0.19
PNKP-225ENST00000636214 IGHV3-11P01762 117 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 TRGV3P03979 118 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 GSTT2P0CG29 244 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 GSTT2BP0CG30 244 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 GALP22466 123 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 PITPNAQ00169 270 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 PLA2G7Q13093 441 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 MOGAT2Q3SYC2 334 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 C19orf54Q5BKX5 351 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 IGSF11Q5DX21 431 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 WWC2-AS2Q96NR7 200 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 ATG5Q9H1Y0 275 aa13.89□□□□□ -0.19
PNKP-225ENST00000636214 TRBV6-7A0A0A0MS04 114 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 C13orf42A0A1B0GVH6 325 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 MFNGO00587 321 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 ARPC1BO15143 372 aaKnown RBP13.88□□□□□ -0.19
PNKP-225ENST00000636214 SHOXO15266 292 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 RRASP10301 218 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 PSMB9P28065 219 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 SLURP1P55000 103 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 ASPHD1Q5U4P2 390 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 OR6Q1Q8NGQ2 317 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 MAFIPQ8WZ33 124 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 DLX4Q92988 240 aaPredicted RBP13.88□□□□□ -0.19
PNKP-225ENST00000636214 KCNK7Q9Y2U2 307 aa13.88□□□□□ -0.19
PNKP-225ENST00000636214 IGHV4OR15-8A0A075B7B6 117 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 A0A087WW49 117 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 A0A0B4J203 849 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 RAB27BO00194 218 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 PROP1O75360 226 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 HSPB1P04792 205 aaKnown RBP13.87□□□□□ -0.19
PNKP-225ENST00000636214 EGR2P11161 476 aaPredicted RBP13.87□□□□□ -0.19
PNKP-225ENST00000636214 LINC00205P59089 165 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 POC5Q8NA72 575 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 FCGR1BQ92637 280 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 ADTRPQ96IZ2 230 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 ELOVL1Q9BW60 279 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 TPSG1Q9NRR2 321 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 SDHAF2Q9NX18 166 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 ZNF230Q9UIE0 474 aaPredicted RBP13.87□□□□□ -0.19
PNKP-225ENST00000636214 LSM4Q9Y4Z0 139 aaKnown RBP13.87□□□□□ -0.19
PNKP-225ENST00000636214 SMAD5-AS1Q9Y6J3 95 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 DNAH9Q9NYC9 4486 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 TENM3Q9P273 2699 aa13.87□□□□□ -0.19
PNKP-225ENST00000636214 A0A0G2JLM5 398 aa13.86□□□□□ -0.19
PNKP-225ENST00000636214 SHISA3A0PJX4 238 aa13.86□□□□□ -0.19
PNKP-225ENST00000636214 H3BUA1 57 aa13.86□□□□□ -0.19
PNKP-225ENST00000636214 VMA21Q3ZAQ7 101 aa13.86□□□□□ -0.19
PNKP-225ENST00000636214 TMEM68Q96MH6 324 aa13.86□□□□□ -0.19
PNKP-225ENST00000636214 PHB2Q99623 299 aa13.86□□□□□ -0.19
PNKP-225ENST00000636214 U3KQK5 164 aa13.86□□□□□ -0.19
PNKP-225ENST00000636214 SMIM30A4D0T7 59 aa13.85□□□□□ -0.19
PNKP-225ENST00000636214 NOTOA8MTQ0 251 aa13.85□□□□□ -0.19
PNKP-225ENST00000636214 SCGNO76038 276 aa13.85□□□□□ -0.19
PNKP-225ENST00000636214 DTYMKP23919 212 aa13.85□□□□□ -0.19
PNKP-225ENST00000636214 SRSF7Q16629 238 aaKnown RBP eCLIP13.85□□□□□ -0.19
PNKP-225ENST00000636214 UBE2UQ5VVX9 321 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms