RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 HES3Q5TGS1 186 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 SLC35E4Q6ICL7 350 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 CENPVQ7Z7K6 275 aaPredicted RBP9.43□□□□□ -0.9
VARS2-213ENST00000625423 GATAD1Q8WUU5 269 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 OR5H1A6NKK0 313 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 PMS2P5A8MQ11 134 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 DEFB108AA8MXU0 73 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 WISP2O76076 250 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 OPN1MWP04001 364 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 OPN1MW2P0DN77 364 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 OPN1MW3P0DN78 364 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 SSTR5P35346 364 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 NCR3LG1Q68D85 454 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 OR10P1Q8NGE3 313 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 OR10G9Q8NGN4 311 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 OR10G7Q8NGN6 311 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 RFESDQ8TAC1 157 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 TRIB1Q96RU8 372 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 TMEM147Q9BVK8 224 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 NAT8Q9UHE5 227 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 ICE1Q9Y2F5 2266 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 TRBV24-1A0A075B6N3 115 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 TMEM241Q24JQ0 296 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 FFAR4Q5NUL3 377 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 ACP7Q6ZNF0 438 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 CNEP1R1Q8N9A8 125 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 ZNF383Q8NA42 475 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 TMEM178AQ8NBL3 297 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 NECAP1Q8NC96 275 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 CTDSP1Q9GZU7 261 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 DMRT1Q9Y5R6 373 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 LINC00473A8K010 186 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 C1QTNF9BB2RNN3 333 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 PTBP3O95758 552 aaKnown RBP9.42□□□□□ -0.9
VARS2-213ENST00000625423 DEFA4P12838 97 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 PSMB3P49720 205 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 PMS2P11Q13670 270 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 ATP6V1FQ16864 119 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 INO80CQ6PI98 192 aaPredicted RBP9.42□□□□□ -0.9
VARS2-213ENST00000625423 H2BFWTQ7Z2G1 175 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 ASPMQ8IZT6 3477 aa9.42□□□□□ -0.9
VARS2-213ENST00000625423 USF3Q68DE3 2245 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.41□□□□□ -0.9
VARS2-213ENST00000625423 CTXND1A0A1B0GTU2 59 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 PHOX2AO14813 284 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 KBTBD11O94819 623 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 WDR82Q6UXN9 313 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 CYP2G1PQ6ZSU1 146 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 FAM214BQ7L5A3 538 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 C16orf82Q7Z2V1 217 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 OR13A1Q8NGR1 328 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 MSL2Q9HCI7 577 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 CLCF1Q9UBD9 225 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 LOC400499M0QZD8 3231 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 ELOA3CA0A087WX78 387 aaPredicted RBP9.41□□□□□ -0.9
VARS2-213ENST00000625423 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 CLDN14O95500 239 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 FABP4P15090 132 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 COL10A1Q03692 680 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 Q3ZCU0 254 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 C9orf152Q5JTZ5 239 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 Q6ZT83 130 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 SNX22Q96L94 193 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 AGMATQ9BSE5 352 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 CXXC4Q9H2H0 198 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 RAB29O14966 203 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 TIMM8AO60220 97 aaPredicted RBP9.41□□□□□ -0.9
VARS2-213ENST00000625423 FABP6P51161 128 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 SOX8P57073 446 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
VARS2-213ENST00000625423 LTC4SQ16873 150 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 BSXQ3C1V8 233 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 DEFB124Q8NES8 71 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 OR4F5Q8NH21 305 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 OR4F4Q96R69 305 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 DCTN5Q9BTE1 182 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 NPCDR1Q9BY65 106 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 PARLQ9H300 379 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 PSG11Q9UQ72 335 aa9.41□□□□□ -0.9
VARS2-213ENST00000625423 TNFSF10P50591 281 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 RAB24Q969Q5 203 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 PLPPR2Q96GM1 343 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 SPAARA0A1B0GVQ0 90 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 TGOLN2O43493 480 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 MBP02144 154 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 COX5AP20674 150 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 HOXC12P31275 282 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 RTP5Q14D33 572 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 VWA1Q6PCB0 445 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 WDR31Q8NA23 367 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 OR10A7Q8NGE5 316 aa9.4□□□□□ -0.9
VARS2-213ENST00000625423 MRPL37Q9BZE1 423 aaKnown RBP9.4□□□□□ -0.9
VARS2-213ENST00000625423 ACTR3CQ9C0K3 210 aaPredicted RBP9.4□□□□□ -0.9
VARS2-213ENST00000625423 APC2O95996 2303 aa9.4□□□□□ -0.91
VARS2-213ENST00000625423 DOCK11Q5JSL3 2073 aa9.4□□□□□ -0.91
VARS2-213ENST00000625423 PRR14LQ5THK1 2151 aa9.4□□□□□ -0.91
VARS2-213ENST00000625423 MARCH11A6NNE9 402 aa9.4□□□□□ -0.91
VARS2-213ENST00000625423 TMEM250H0YL14 139 aa9.4□□□□□ -0.91
VARS2-213ENST00000625423 IGKV3-15P01624 115 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms