RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 IGHV2-5P01817 119 aa12.4□□□□□ -0.42
COPS7B-224ENST00000620578 CXorf66Q5JRM2 361 aaPredicted RBP12.4□□□□□ -0.42
COPS7B-224ENST00000620578 CLEC9AQ6UXN8 241 aa12.4□□□□□ -0.42
COPS7B-224ENST00000620578 SLC25A48Q6ZT89 311 aaKnown RBP12.4□□□□□ -0.42
COPS7B-224ENST00000620578 FAM168AQ92567 244 aa12.4□□□□□ -0.42
COPS7B-224ENST00000620578 TMEM56Q96MV1 263 aa12.4□□□□□ -0.42
COPS7B-224ENST00000620578 MBD2Q9UBB5 411 aa12.4□□□□□ -0.42
COPS7B-224ENST00000620578 NSG2Q9Y328 171 aa12.4□□□□□ -0.42
COPS7B-224ENST00000620578 TMEM56-RWDD3S4R434 201 aa12.4□□□□□ -0.42
COPS7B-224ENST00000620578 A0A0B4J2A0 478 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 MPC2O95563 127 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 ESCO2Q56NI9 601 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 LDLRAD2Q5SZI1 272 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 SHPKQ9UHJ6 478 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 ITPR3Q14573 2671 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 KIAA1324LA8MWY0 1029 aaPredicted RBP12.39□□□□□ -0.43
COPS7B-224ENST00000620578 IL15RAQ13261 267 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 ZNF383Q8NA42 475 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 RBPMSQ93062 196 aaKnown RBP12.39□□□□□ -0.43
COPS7B-224ENST00000620578 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 GPR146Q96CH1 333 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 C2orf50Q96LR7 162 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 HYLS1Q96M11 299 aa12.39□□□□□ -0.43
COPS7B-224ENST00000620578 LSM5Q9Y4Y9 91 aaKnown RBP12.39□□□□□ -0.43
COPS7B-224ENST00000620578 AKAP9Q99996 3911 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 IGHV3-72A0A0B4J1Y9 119 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 LOC105371267A0A1B0GV96 52 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 RGS11O94810 467 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 RRNAD1Q96FB5 475 aaKnown RBP12.38□□□□□ -0.43
COPS7B-224ENST00000620578 SONP18583 2426 aaKnown RBP12.38□□□□□ -0.43
COPS7B-224ENST00000620578 F5H0A9 414 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-224ENST00000620578 J3QR06 171 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 FSTL3O95633 263 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 IFNA21P01568 189 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 MBPP02686 304 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-224ENST00000620578 IGKV1-16P04430 117 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 IFITM2Q01629 132 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 LRTM2Q8N967 370 aa12.38□□□□□ -0.43
COPS7B-224ENST00000620578 FLNBO75369 2602 aaKnown RBP12.38□□□□□ -0.43
COPS7B-224ENST00000620578 RAB29O14966 203 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 CT45A6P0DMU7 189 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 CT45A5P0DMU8 189 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 CT45A7P0DMV0 189 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 PSMB6P28072 239 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 S100GP29377 79 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 PDLIM4P50479 330 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 NMSQ5H8A3 153 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 LY6G5BQ8NDX9 201 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 OR10X1Q8NGY0 326 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 TMEM133Q9H2Q1 129 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 TRBV23-1A0A0A0MS06 115 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 MSGN1A6NI15 193 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 AKR1C2P52895 323 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 ZNF546Q86UE3 836 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 OR1S1Q8NH92 325 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 RNASE11Q8TAA1 199 aaKnown RBP12.37□□□□□ -0.43
COPS7B-224ENST00000620578 C10orf105Q8TEF2 133 aa12.37□□□□□ -0.43
COPS7B-224ENST00000620578 MRPL20Q9BYC9 149 aaKnown RBP12.37□□□□□ -0.43
COPS7B-224ENST00000620578 IGHV2-26A0A0B4J1V2 119 aa12.36□□□□□ -0.43
COPS7B-224ENST00000620578 LIPFP07098 398 aa12.36□□□□□ -0.43
COPS7B-224ENST00000620578 SRSF4Q08170 494 aaKnown RBP12.36□□□□□ -0.43
COPS7B-224ENST00000620578 SPINK9Q5DT21 86 aa12.36□□□□□ -0.43
COPS7B-224ENST00000620578 PCGF1Q9BSM1 259 aa12.36□□□□□ -0.43
COPS7B-224ENST00000620578 COMMD9Q9P000 198 aa12.36□□□□□ -0.43
COPS7B-224ENST00000620578 MXRA5Q9NR99 2828 aa12.36□□□□□ -0.43
COPS7B-224ENST00000620578 FLNAP21333 2647 aaKnown RBP12.36□□□□□ -0.43
COPS7B-224ENST00000620578 POLR2GP62487 172 aaKnown RBP eCLIP12.36□□□□□ -0.43
COPS7B-224ENST00000620578 RITA1Q96K30 269 aa12.36□□□□□ -0.43
COPS7B-224ENST00000620578 NMES1Q9C002 83 aa12.36□□□□□ -0.43
COPS7B-224ENST00000620578 LIN7CQ9NUP9 197 aaKnown RBP12.36□□□□□ -0.43
COPS7B-224ENST00000620578 CACNG5Q9UF02 275 aa12.36□□□□□ -0.43
COPS7B-224ENST00000620578 TRAV3A0A0B4J244 114 aa12.35□□□□□ -0.43
COPS7B-224ENST00000620578 CRYZL1O95825 349 aa12.35□□□□□ -0.43
COPS7B-224ENST00000620578 VDAC1P21796 283 aa12.35□□□□□ -0.43
COPS7B-224ENST00000620578 LHFPL4Q7Z7J7 247 aa12.35□□□□□ -0.43
COPS7B-224ENST00000620578 CD24P25063 80 aa12.35□□□□□ -0.43
COPS7B-224ENST00000620578 CLEC2AQ6UVW9 174 aa12.35□□□□□ -0.43
COPS7B-224ENST00000620578 C8orf46Q8TAG6 207 aa12.35□□□□□ -0.43
COPS7B-224ENST00000620578 DCUN1D4Q92564 292 aa12.35□□□□□ -0.43
COPS7B-224ENST00000620578 HSD17B10Q99714 261 aaKnown RBP12.35□□□□□ -0.43
COPS7B-224ENST00000620578 SESN1Q9Y6P5 492 aa12.35□□□□□ -0.43
COPS7B-224ENST00000620578 MYOD1P15172 320 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 RAB7AP51149 207 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 PAX2Q02962 417 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 ZBTB34Q8NCN2 500 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 SUN5Q8TC36 379 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 DDB2Q92466 427 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 BSCL2Q96G97 398 aaPredicted RBP12.34□□□□□ -0.43
COPS7B-224ENST00000620578 LPAR3Q9UBY5 353 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 TMED3Q9Y3Q3 217 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 IGHV3OR16-10A0A075B7F0 116 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 RNF222A6NCQ9 220 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 SRRM4A7MD48 611 aaKnown RBP12.34□□□□□ -0.43
COPS7B-224ENST00000620578 CATR1Q13166 79 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 HCP5Q6MZN7 132 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 OR4D5Q8NGN0 318 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 MFFQ9GZY8 342 aa12.34□□□□□ -0.43
COPS7B-224ENST00000620578 TET2Q6N021 2002 aaPredicted RBP12.34□□□□□ -0.43
COPS7B-224ENST00000620578 K7EPK0 472 aa12.33□□□□□ -0.44
COPS7B-224ENST00000620578 GOSR1O95249 250 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms