RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 LIN7CQ9NUP9 197 aaKnown RBP3.6□□□□□ -1.83
SEC22B-202ENST00000618538 HSPB7Q9UBY9 170 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 KLF13Q9Y2Y9 288 aaPredicted RBP3.6□□□□□ -1.83
SEC22B-202ENST00000618538 CADP27708 2225 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 TRGV5A0A0B4J1U4 118 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 IGHV3-43A0A0B4J1X8 118 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 TRAV20A0A0B4J274 112 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 MAP1LC3B2A6NCE7 125 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 CYB5BO43169 146 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 ZG16O60844 167 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 TNFSF15O95150 251 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 KRASP01116 189 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 IFNA5P01569 189 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 HBZP02008 142 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 HBE1P02100 147 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 SP9P0CG40 484 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 IGHV3-43DP0DP04 118 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 GZMHP20718 246 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 NPPCP23582 126 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 CDX1P47902 265 aaPredicted RBP3.6□□□□□ -1.83
SEC22B-202ENST00000618538 NDUFA6P56556 154 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 FOXF2Q12947 444 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 SLC10A1Q14973 349 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 RTP5Q14D33 572 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 GABRA6Q16445 453 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 PRSS8Q16651 343 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 TBC1D28Q2M2D7 210 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 ZNF674Q2M3X9 581 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 TMEM41BQ5BJD5 291 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 PDZD11Q5EBL8 140 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 GCSAMLQ5JQS6 135 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 HES3Q5TGS1 186 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 VWA1Q6PCB0 445 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 WDR82Q6UXN9 313 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 DMRTC2Q8IXT2 367 aaPredicted RBP3.6□□□□□ -1.83
SEC22B-202ENST00000618538 HIST3H2BBQ8N257 126 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 ZNF645Q8N7E2 425 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 ZNF610Q8N9Z0 462 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 WDR31Q8NA23 367 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 OR13A1Q8NGR1 328 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 RNASE11Q8TAA1 199 aaKnown RBP3.6□□□□□ -1.83
SEC22B-202ENST00000618538 ELOVL1Q9BW60 279 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 GPR61Q9BZJ8 451 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 MAP1LC3BQ9GZQ8 125 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 OR51M1Q9H341 326 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 SLC25A22Q9H936 323 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 OTOGLQ3ZCN5 2332 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 PCNX2A6NKB5 2137 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 ZNF292O60281 2723 aa3.6□□□□□ -1.83
SEC22B-202ENST00000618538 CXorf65A6NEN9 183 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 CEBPZOSA8MTT3 80 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 DEFB108AA8MXU0 73 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 KALRNO60229 2985 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 CLDN1O95832 211 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 CYB5R3P00387 301 aaPredicted RBP3.59□□□□□ -1.83
SEC22B-202ENST00000618538 IFNA17P01571 189 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 TRGC1P0CF51 173 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 RAC2P15153 192 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 EGR1P18146 543 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 SLC25A24Q6NUK1 477 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 FAM180AQ6UWF9 173 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 UNQ6494/PRO21346Q6UXR6 183 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 ACP7Q6ZNF0 438 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 CENPVQ7Z7K6 275 aaPredicted RBP3.59□□□□□ -1.83
SEC22B-202ENST00000618538 WFDC8Q8IUA0 241 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 LILRB2Q8N423 598 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 DEFB123Q8N688 67 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 CD177Q8N6Q3 437 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 C9orf106Q8NAJ2 232 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 MRGPRDQ8TDS7 321 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 PLPPR2Q96GM1 343 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 AGMATQ9BSE5 352 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 PARD6GQ9BYG4 376 aaPredicted RBP3.59□□□□□ -1.83
SEC22B-202ENST00000618538 PRDM13Q9H4Q3 707 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 CDH20Q9HBT6 801 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 MSL2Q9HCI7 577 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 UFSP2Q9NUQ7 469 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 ABI3Q9P2A4 366 aa3.59□□□□□ -1.83
SEC22B-202ENST00000618538 INTS1Q8N201 2190 aaKnown RBP3.59□□□□□ -1.83
SEC22B-202ENST00000618538 TET2Q6N021 2002 aaPredicted RBP3.59□□□□□ -1.83
SEC22B-202ENST00000618538 ANKRD11Q6UB99 2663 aaPredicted RBP3.59□□□□□ -1.83
SEC22B-202ENST00000618538 TMEM30CPA0ZSE6 113 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 OR5H1A6NKK0 313 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 LRRC30A6NM36 301 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 C15orf62A8K5M9 175 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 FAM90A26D6RGX4 464 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 KLRC4-KLRK1H3BQV0 150 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 C15orf65H3BRN8 121 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 SH2D1BO14796 132 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 IGKV3-15P01624 115 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 PFN1P07737 140 aaKnown RBP3.59□□□□□ -1.84
SEC22B-202ENST00000618538 OR9G9P0C7N8 305 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 CECR9P0C854 216 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 COX5AP20674 150 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 BMP5P22003 454 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 KIR2DL2P43627 348 aaPredicted RBP3.59□□□□□ -1.84
SEC22B-202ENST00000618538 TNFSF10P50591 281 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 SOX8P57073 446 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 SERF2P84101 59 aa3.59□□□□□ -1.84
SEC22B-202ENST00000618538 ACSF3Q4G176 576 aaPredicted RBP3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms