RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 BUB1B-PAK6H3BSN5 160 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 J3QLI3 93 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 TOR1AO14656 332 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 RAB29O14966 203 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 MPPED1O15442 326 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 TCF21O43680 179 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 SFT2D2O95562 160 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 IL5P05113 134 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 CT45A6P0DMU7 189 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 CT45A5P0DMU8 189 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 CT45A7P0DMV0 189 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 DUTP33316 252 aaKnown RBP6.49□□□□□ -1.37
PCDH9-205ENST00000614931 TAS2R31P59538 309 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 DHRS2Q13268 280 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 TMEM187Q14656 261 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 SLC9A3R2Q15599 337 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 C2orf68Q2NKX9 166 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 ANKRD55Q3KP44 614 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 SP6Q3SY56 376 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 ABCA11PQ4W5N1 156 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 OR2B11Q5JQS5 317 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 LPCAT3Q6P1A2 487 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 FAHD2BQ6P2I3 314 aaPredicted RBP6.49□□□□□ -1.37
PCDH9-205ENST00000614931 LYG2Q86SG7 212 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 PIP4P2Q8N4L2 257 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 TEX29Q8N6K0 151 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.49□□□□□ -1.37
PCDH9-205ENST00000614931 OR10X1Q8NGY0 326 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 RTN4IP1Q8WWV3 396 aaPredicted RBP6.49□□□□□ -1.37
PCDH9-205ENST00000614931 DDB2Q92466 427 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 FAHD2AQ96GK7 314 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 AKR1E2Q96JD6 320 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 SCGB3A2Q96PL1 93 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 NABP2Q9BQ15 211 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 GHITMQ9H3K2 345 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 CUBNO60494 3623 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 ATRQ13535 2644 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 PLXNB1O43157 2135 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 COL6A5A8TX70 2615 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 TNCP24821 2201 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 IGHV1-69DA0A0B4J2H0 117 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 A0A1W2PPI3 338 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 NPFFO15130 113 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 IGKV1-39P01597 117 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 IGHV1-69P01742 117 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 IGKV1D-39P04432 117 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 OR5AC1P0C628 307 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 VAMP1P23763 118 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 GATA3P23771 443 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 F2RP25116 425 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 SAA4P35542 130 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 UBE2E1P51965 193 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 PRRX1P54821 245 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 C4orf46Q504U0 113 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF585BQ52M93 769 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 TMEM128Q5BJH2 165 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 TPTE2P1Q5T6R2 138 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 LIN54Q6MZP7 749 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 BRD3OSQ6XYD6 125 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 CADM3Q8N126 398 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 CCDC71LQ8N9Z2 235 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 ZBTB34Q8NCN2 500 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF431Q8TF32 576 aaPredicted RBP6.48□□□□□ -1.37
PCDH9-205ENST00000614931 CASTOR1Q8WTX7 329 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 GLYATL2Q8WU03 294 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 TCTEX1D2Q8WW35 142 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 GALNT14Q96FL9 552 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 PIPOXQ9P0Z9 390 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 DNHD1Q96M86 4753 aa6.48□□□□□ -1.37
PCDH9-205ENST00000614931 IGHV3-72A0A0B4J1Y9 119 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 A0A0G2JRQ6 117 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 TEX13DA0A0J9YY54 714 aaPredicted RBP6.47□□□□□ -1.37
PCDH9-205ENST00000614931 C3orf85A0A1B0GTC6 90 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 H0Y980 276 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 H0YJW9 148 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 PRAF2O60831 178 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 RAMP3O60896 148 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 SLC22A5O76082 557 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 DHFRP00374 187 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 HLA-AP01891 365 aaKnown RBP6.47□□□□□ -1.37
PCDH9-205ENST00000614931 UCP1P25874 307 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF816Q0VGE8 651 aaPredicted RBP6.47□□□□□ -1.37
PCDH9-205ENST00000614931 CBX3Q13185 183 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 SCGB2A2Q13296 93 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 FAM71F2Q6NXP2 309 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF66Q6ZN08 573 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 KCTD9Q7L273 389 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 TGIF2LXQ8IUE1 241 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 CFHR4Q92496 578 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 WDR89Q96FK6 387 aaPredicted RBP6.47□□□□□ -1.37
PCDH9-205ENST00000614931 S1PR3Q99500 378 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 OR51J1Q9H342 316 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 DPM3Q9P2X0 92 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 AMMECR1Q9Y4X0 333 aaPredicted RBP6.47□□□□□ -1.37
PCDH9-205ENST00000614931 HILPDAQ9Y5L2 63 aa6.47□□□□□ -1.37
PCDH9-205ENST00000614931 IGHV1-3A0A0C4DH29 117 aa6.46□□□□□ -1.38
PCDH9-205ENST00000614931 A0A0U1RQK1 487 aa6.46□□□□□ -1.38
PCDH9-205ENST00000614931 MDFIC2A0A1B0GVS7 189 aa6.46□□□□□ -1.38
PCDH9-205ENST00000614931 DBX1A6NMT0 343 aa6.46□□□□□ -1.38
PCDH9-205ENST00000614931 SNRPGP15A8MWD9 76 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms