RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 RCVRNP35243 200 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 IFNGR2P38484 337 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 HSPA9P38646 679 aaKnown RBP0.07□□□□□ -2.4
TUBE1-205ENST00000603651 STC1P52823 247 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 AQP4P55087 323 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 RBM11P57052 281 aaKnown RBP0.07□□□□□ -2.4
TUBE1-205ENST00000603651 TAS2R45P59539 299 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 TAS2R30P59541 319 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 MESTQ5EB52 335 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 C9orf163Q8N9P6 203 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 OR1L8Q8NGR8 309 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 OR51H1Q8NH63 302 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 FAM210AQ96ND0 272 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 HBEGFQ99075 208 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 PRRG3Q9BZD7 231 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 NKX6-2Q9C056 277 aaPredicted RBP0.07□□□□□ -2.4
TUBE1-205ENST00000603651 SLC2A9Q9NRM0 540 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 MRM2Q9UI43 246 aaKnown RBP0.07□□□□□ -2.4
TUBE1-205ENST00000603651 ENPP5Q9UJA9 477 aa0.07□□□□□ -2.4
TUBE1-205ENST00000603651 SIPA1L1O43166 1804 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 LAMA4Q16363 1823 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 SMARCA4P51532 1647 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 THSD7AQ9UPZ6 1657 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 TRAPPC13A5PLN9 417 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 SGCEO43556 437 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 KLRC4O43908 158 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 NDUFB2O95178 105 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 PSMG1O95456 288 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 ASS1P00966 412 aaKnown RBP0.06□□□□□ -2.4
TUBE1-205ENST00000603651 CST4P01036 141 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 NPYP01303 97 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 LIMS3P0CW19 117 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 LIMS4P0CW20 117 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 OR10J1P30954 320 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 PSMD7P51665 324 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 HERVK_113P63121 156 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 RAB31Q13636 194 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 SPATA31B1PQ5VZV4 182 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 PACRGLQ8N7B6 248 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 DAND5Q8N907 189 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 OR2D3Q8NGH3 330 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 IFT81Q8WYA0 676 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 TTTY13Q9BZ97 58 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 UBQLN4Q9NRR5 601 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 MS4A12Q9NXJ0 267 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 RBM7Q9Y580 266 aaKnown RBP0.06□□□□□ -2.4
TUBE1-205ENST00000603651 SNURFQ9Y675 71 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 KIAA0232Q92628 1395 aa0.06□□□□□ -2.4
TUBE1-205ENST00000603651 NPATQ14207 1427 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 ANKRD17O75179 2603 aaKnown RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 A0A087WUU8 490 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 IGHV1-18A0A0C4DH31 117 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 RAB19A4D1S5 217 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 MRASO14807 208 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 GSTZ1O43708 216 aaPredicted RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 UGT2B11O75310 529 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 BRI3O95415 125 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 LDOC1O95751 146 aaPredicted RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 SERPINA7P05543 415 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 DEFA4P12838 97 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 CCL2P13500 99 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 CA7P43166 264 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 CDK9P50750 372 aaKnown RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 C1DQ13901 141 aaKnown RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 FLOT2Q14254 428 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 USF2Q15853 346 aaPredicted RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 ARHGAP11BQ3KRB8 267 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 TTC33Q6PID6 262 aaPredicted RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 LYZL1Q6UWQ5 148 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 LRRC6Q86X45 466 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 SLC13A5Q86YT5 568 aaPredicted RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 C1orf174Q8IYL3 243 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 TMEM239Q8WW34 195 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 RORBQ92753 470 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 SFRP2Q96HF1 295 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 TMEM56Q96MV1 263 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 UGT2B28Q9BY64 529 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 REG4Q9BYZ8 158 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 COMMD9Q9P000 198 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 TAAR3PQ9P1P4 343 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 POFUT2Q9Y2G5 429 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 POLR3HQ9Y535 204 aaPredicted RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 SNX10Q9Y5X0 201 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 ABCC12Q96J65 1359 aa0.05□□□□□ -2.4
TUBE1-205ENST00000603651 DICER1Q9UPY3 1922 aaKnown RBP0.05□□□□□ -2.4
TUBE1-205ENST00000603651 NUP153P49790 1475 aaKnown RBP0.04□□□□□ -2.4
TUBE1-205ENST00000603651 SCAF11Q99590 1463 aaKnown RBP0.04□□□□□ -2.4
TUBE1-205ENST00000603651 STRCQ7RTU9 1775 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 TNRC6BQ9UPQ9 1833 aaKnown RBP0.04□□□□□ -2.4
TUBE1-205ENST00000603651 GLI3P10071 1580 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 A0A0D9SEW6 157 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 M0R381 172 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 ORC5O43913 435 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 ARL6IP5O75915 188 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 SNAP29O95721 258 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 GP1BAP07359 652 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 SLC35E2BP0CK96 405 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 NQO2P16083 231 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 ADORA1P30542 326 aa0.04□□□□□ -2.4
TUBE1-205ENST00000603651 LCN1P31025 176 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms