RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 HARBI1Q96MB7 349 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 NKX2-6A6NCS4 301 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 RPS27P42677 84 aaKnown RBP10.69□□□□□ -0.7
SHANK2-218ENST00000601538 C1orf194Q5T5A4 169 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 H2BFSP57053 126 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 FOXF1Q12946 379 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 UBE2V1Q13404 147 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 CXCL13O43927 109 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 LINC00869P0C866 280 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 UMODP07911 640 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 MAJINQ3KP22 176 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 TMEM177Q53S58 311 aa10.69□□□□□ -0.7
SHANK2-218ENST00000601538 IGHV3-15A0A0B4J1V0 119 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 PLPP3O14495 311 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 TNFAIP6P98066 277 aaPredicted RBP10.68□□□□□ -0.7
SHANK2-218ENST00000601538 C17orf47Q8NEP4 570 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 PXMP4Q9Y6I8 212 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 DENND4CQ5VZ89 1909 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 NKX2-2O95096 273 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 CA7P43166 264 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 BADQ92934 168 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 SPSB4Q96A44 273 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 THADAQ6YHU6 1953 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 TRBV24-1A0A075B6N3 115 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 H3BRM9 83 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 OR4A5Q8NH83 315 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 TBL2Q9Y4P3 447 aaKnown RBP10.68□□□□□ -0.7
SHANK2-218ENST00000601538 LILRA5A6NI73 299 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 J3QR06 171 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 CTSSP25774 331 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 HEPN1Q6WQI6 88 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 TTC9CQ8N5M4 171 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 PDFQ9HBH1 243 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 COL5A3P25940 1745 aaPredicted RBP10.68□□□□□ -0.7
SHANK2-218ENST00000601538 ANKRD34AQ69YU3 496 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 SLC26A1Q9H2B4 701 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 C7orf71A4D174 169 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 MEIG1Q5JSS6 88 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 DYNLRB2Q8TF09 96 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 RGP1Q92546 391 aaPredicted RBP10.68□□□□□ -0.7
SHANK2-218ENST00000601538 DNAJC25-GNG10A0A024R161 153 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 IGHV3-64DA0A0J9YX35 117 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 EBLN2Q6P2I7 272 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 HOGA1Q86XE5 327 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 SIT1Q9Y3P8 196 aa10.68□□□□□ -0.7
SHANK2-218ENST00000601538 MMP23AO75900 390 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 OTX1P32242 354 aaPredicted RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 CYP2G1PQ6ZSU1 146 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 OR8B12Q8NGG6 310 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 ASB10Q8WXI3 467 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 HDHD3Q9BSH5 251 aaPredicted RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 CKS1BP61024 79 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 SNAI3Q3KNW1 292 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 RTN4RL1Q86UN2 441 aaPredicted RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 OR4X2Q8NGF9 303 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 F2RL2O00254 374 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 RBMY1BA6NDE4 496 aaKnown RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 RBMY1EA6NEQ0 496 aaKnown RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 FGF16O43320 207 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 RBMY1DP0C7P1 496 aaKnown RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 RBMY1A1P0DJD3 496 aaKnown RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 RBMY1CP0DJD4 496 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 COL9A2Q14055 689 aaPredicted RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 TMUB1Q9BVT8 246 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 F8VVB4 439 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 F8VWA3 439 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 ZNF774Q6NX45 483 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 SLC23A3Q6PIS1 610 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 TMEM101Q96IK0 257 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 TIMP4Q99727 224 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 ADAD2Q8NCV1 583 aaKnown RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 RAB1CQ92928 201 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 PGLYRP3Q96LB9 341 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 TNFRSF12AQ9NP84 129 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 TRAV30A0A087WSZ9 112 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 SLC25A20O43772 301 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 IGLV3-25P01717 112 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 SRD5A2P31213 254 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 C10orf111Q8N326 155 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 MRPL32Q9BYC8 188 aaKnown RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 DEFB127Q9H1M4 99 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 TMEM56-RWDD3S4R434 201 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 COL18A1P39060 1754 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 H7C1H1 209 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 TNFSF13O75888 250 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 LYZL2Q7Z4W2 148 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 LRRC29Q8WV35 223 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 CNRIP1Q96F85 164 aaPredicted RBP10.67□□□□□ -0.7
SHANK2-218ENST00000601538 TMEM106BQ9NUM4 274 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 TNCP24821 2201 aa10.67□□□□□ -0.7
SHANK2-218ENST00000601538 MPZP25189 248 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 B4GALNT1Q00973 533 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 TMEM249Q2WGJ8 235 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 YBX2Q9Y2T7 364 aaKnown RBP10.66□□□□□ -0.7
SHANK2-218ENST00000601538 PCDH15Q96QU1 1955 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 FFAR1O14842 300 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 ETHE1O95571 254 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 Q6AWC8 147 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms