RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 LDLRAD4O15165 306 aa13.07□□□□□ -0.32
SCAF1-204ENST00000601038 DENRO43583 198 aaKnown RBP13.07□□□□□ -0.32
SCAF1-204ENST00000601038 RGS10O43665 173 aa13.07□□□□□ -0.32
SCAF1-204ENST00000601038 SLC25A17O43808 307 aa13.07□□□□□ -0.32
SCAF1-204ENST00000601038 TRGV3P03979 118 aa13.07□□□□□ -0.32
SCAF1-204ENST00000601038 CALRP27797 417 aaKnown RBP13.07□□□□□ -0.32
SCAF1-204ENST00000601038 AQP4P55087 323 aa13.07□□□□□ -0.32
SCAF1-204ENST00000601038 OR4A4PQ8NGN8 299 aa13.07□□□□□ -0.32
SCAF1-204ENST00000601038 NKX1-2Q9UD57 310 aaPredicted RBP13.07□□□□□ -0.32
SCAF1-204ENST00000601038 RAB22AQ9UL26 194 aa13.07□□□□□ -0.32
SCAF1-204ENST00000601038 H3BUA1 57 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 FRMD6-AS1P0C7T7 363 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 LGALS7P47929 136 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 FABP5Q01469 135 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 OVCH2Q7RTZ1 564 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 GRPEL2Q8TAA5 225 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 RCHY1Q96PM5 261 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 MGLLQ99685 303 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 ELOVL1Q9BW60 279 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 ACOT13Q9NPJ3 140 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 ZNF355PQ9NSJ1 428 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 SLC35D1Q9NTN3 355 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 KCNK7Q9Y2U2 307 aa13.06□□□□□ -0.32
SCAF1-204ENST00000601038 TMEM272A0A1B0GTI8 110 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 ANKRD65E5RJM6 399 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 FABP7O15540 132 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 CNIH1O95406 144 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 IGLV2-23P01705 113 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 CD3GP09693 182 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 MRPS15P82914 257 aaKnown RBP13.05□□□□□ -0.32
SCAF1-204ENST00000601038 PRSS48Q7RTY5 328 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 POC5Q8NA72 575 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 NRG4Q8WWG1 115 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 TMEM68Q96MH6 324 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 CCDC90BQ9GZT6 254 aa13.05□□□□□ -0.32
SCAF1-204ENST00000601038 RANGRFQ9HD47 186 aaPredicted RBP13.05□□□□□ -0.32
SCAF1-204ENST00000601038 A0A0G2JLM5 398 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 C13orf42A0A1B0GVH6 325 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 TRIM64CA6NLI5 447 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 DIRAS3O95661 229 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 CRYGBP07316 175 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 ZP3P21754 424 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 CRHBPP24387 322 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 SSBP2P81877 361 aaPredicted RBP13.04□□□□□ -0.32
SCAF1-204ENST00000601038 TAGLNQ01995 201 aaKnown RBP13.04□□□□□ -0.32
SCAF1-204ENST00000601038 PLA2G7Q13093 441 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 MOGAT2Q3SYC2 334 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 IGSF11Q5DX21 431 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 HES5Q5TA89 166 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 OR5T1Q8NG75 326 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 OR10J5Q8NHC4 309 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 MUC7Q8TAX7 377 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 RAB3CQ96E17 227 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 CABLES2Q9BTV7 478 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 OR2D2Q9H210 308 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 SDHAF2Q9NX18 166 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 STUB1Q9UNE7 303 aa13.04□□□□□ -0.32
SCAF1-204ENST00000601038 TRBV6-7A0A0A0MS04 114 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 ERICH4A6NGS2 130 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 BET1O15155 118 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 BRI3O95415 125 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 IGLV1-51P01701 117 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 FCGR3AP08637 254 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 GSTT2P0CG29 244 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 GSTT2BP0CG30 244 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 MAP2K4P45985 399 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 PJVKQ0ZLH3 352 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 ZMAT4Q9H898 229 aa13.03□□□□□ -0.32
SCAF1-204ENST00000601038 SRSF7Q16629 238 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCAF1-204ENST00000601038 TMEM177Q53S58 311 aa13.02□□□□□ -0.33
SCAF1-204ENST00000601038 ANKRD13BQ86YJ7 626 aa13.02□□□□□ -0.33
SCAF1-204ENST00000601038 OR10R2Q8NGX6 335 aa13.02□□□□□ -0.33
SCAF1-204ENST00000601038 HARBI1Q96MB7 349 aa13.02□□□□□ -0.33
SCAF1-204ENST00000601038 TRAV1-2A0A0B4J238 106 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 RAB27BO00194 218 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 MFNGO00587 321 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 PDCD5O14737 125 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 SHOXO15266 292 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 RRASP10301 218 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 GNB3P16520 340 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 GADD45AP24522 165 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 CBX3Q13185 183 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 KLF5Q13887 457 aaPredicted RBP13.01□□□□□ -0.33
SCAF1-204ENST00000601038 RTL8BQ17RB0 113 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 CASC10Q5T4H9 136 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 Q8N1Y9 231 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 BVESQ8NE79 360 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 CENPOQ9BU64 300 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 RSRP1Q9BUV0 290 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 STAB2Q8WWQ8 2551 aa13.01□□□□□ -0.33
SCAF1-204ENST00000601038 ANKRD34BA5PLL1 514 aa13□□□□□ -0.33
SCAF1-204ENST00000601038 IFITM5A6NNB3 132 aa13□□□□□ -0.33
SCAF1-204ENST00000601038 SRRM4A7MD48 611 aaKnown RBP13□□□□□ -0.33
SCAF1-204ENST00000601038 A8MZ25 164 aa13□□□□□ -0.33
SCAF1-204ENST00000601038 RAB6AP20340 208 aa13□□□□□ -0.33
SCAF1-204ENST00000601038 AADACP22760 399 aa13□□□□□ -0.33
SCAF1-204ENST00000601038 OR10A3P58181 314 aa13□□□□□ -0.33
SCAF1-204ENST00000601038 TBCEQ15813 527 aaPredicted RBP13□□□□□ -0.33
SCAF1-204ENST00000601038 SSX1Q16384 188 aa13□□□□□ -0.33
SCAF1-204ENST00000601038 HAPLN4Q86UW8 402 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms