RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 ADTRPQ96IZ2 230 aa15.43■□□□□ 0.06
UPF1-209ENST00000600310 THAP7Q9BT49 309 aaPredicted RBP15.43■□□□□ 0.06
UPF1-209ENST00000600310 TINAGL1Q9GZM7 467 aaPredicted RBP15.43■□□□□ 0.06
UPF1-209ENST00000600310 SLC5A7Q9GZV3 580 aa15.43■□□□□ 0.06
UPF1-209ENST00000600310 CCL28Q9NRJ3 127 aa15.43■□□□□ 0.06
UPF1-209ENST00000600310 MOB4Q9Y3A3 225 aa15.43■□□□□ 0.06
UPF1-209ENST00000600310 WASHC3Q9Y3C0 194 aa15.43■□□□□ 0.06
UPF1-209ENST00000600310 RAB3DO95716 219 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 IFNA6P05013 189 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 STEAP1BQ6NZ63 245 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 LINC00299Q6ZSB3 139 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 ARRDC1Q8N5I2 433 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 ZBTB34Q8NCN2 500 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 OR8H1Q8NGG4 311 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 OR4C13Q8NGP0 309 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 SRRQ9GZT4 340 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 C16orf95Q9H693 158 aa15.42■□□□□ 0.06
UPF1-209ENST00000600310 STAB1Q9NY15 2570 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 ANKRD20A5PA0PJZ0 165 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 FGF16O43320 207 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 APOA2P02652 100 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 AMY1AP04745 511 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 AMY2AP04746 511 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 COMPP49747 757 aaPredicted RBP15.41■□□□□ 0.06
UPF1-209ENST00000600310 BLCAPP62952 87 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 TAGLNQ01995 201 aaKnown RBP15.41■□□□□ 0.06
UPF1-209ENST00000600310 EIF4EBP1Q13541 118 aaPredicted RBP15.41■□□□□ 0.06
UPF1-209ENST00000600310 TMEM17Q86X19 198 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 PDPNQ86YL7 162 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 Q8N2B8 174 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 Q8N402 240 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 DDB2Q92466 427 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 TRIM63Q969Q1 353 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 PLSCR3Q9NRY6 295 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 SLC35D1Q9NTN3 355 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 PTTG2Q9NZH5 202 aa15.41■□□□□ 0.06
UPF1-209ENST00000600310 H7C2Y5 167 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 GNRHRP30968 328 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 MEF2DQ14814 521 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 C11orf88Q6PI97 169 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 ZNF66Q6ZN08 573 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 C5orf56Q8N8D9 126 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 OR4D10Q8NGI6 311 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 BORCS5Q969J3 196 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 RITA1Q96K30 269 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 HSD17B10Q99714 261 aaKnown RBP15.4■□□□□ 0.06
UPF1-209ENST00000600310 RNF5Q99942 180 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 PRSS22Q9GZN4 317 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 FXYD6Q9H0Q3 95 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 ZNF702PQ9H963 129 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 MMP24Q9Y5R2 645 aa15.4■□□□□ 0.06
UPF1-209ENST00000600310 A0A1B0GUS0 222 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 LINC00473A8K010 186 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 ZNF735P0CB33 412 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 AKAIN1P0CW23 69 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 RRASP10301 218 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 MDKP21741 143 aaPredicted RBP15.39■□□□□ 0.05
UPF1-209ENST00000600310 F2RL1P55085 397 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 UCP3P55916 312 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 RPL30P62888 115 aaKnown RBP15.39■□□□□ 0.05
UPF1-209ENST00000600310 ZNF45Q02386 682 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 AWAT1Q58HT5 328 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 AADACL3Q5VUY0 350 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 LHFPL1Q86WI0 220 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 GDPD1Q8N9F7 314 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 Q8N9W7 124 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 LINC01006Q8NI28 216 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 BEX1Q9HBH7 125 aa15.39■□□□□ 0.05
UPF1-209ENST00000600310 CLPSL1A2RUU4 121 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 NCBP2LA6PVI3 153 aaKnown RBP15.38■□□□□ 0.05
UPF1-209ENST00000600310 IGKV1-16P04430 117 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 MMDQ15546 238 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 RTL8BQ17RB0 113 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 ABCA11PQ4W5N1 156 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 LPCAT3Q6P1A2 487 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 ZNF818PQ6ZRF7 136 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 Q6ZS46 218 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 KCTD9Q7L273 389 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 BVESQ8NE79 360 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 NPBQ8NG41 125 aa15.38■□□□□ 0.05
UPF1-209ENST00000600310 FLYWCH2Q96CP2 140 aaKnown RBP15.38■□□□□ 0.05
UPF1-209ENST00000600310 KLF9Q13886 244 aaPredicted RBP15.37■□□□□ 0.05
UPF1-209ENST00000600310 FAAP20Q6NZ36 180 aa15.37■□□□□ 0.05
UPF1-209ENST00000600310 MFSD4AQ8N468 514 aa15.37■□□□□ 0.05
UPF1-209ENST00000600310 OR4C16Q8NGL9 310 aa15.37■□□□□ 0.05
UPF1-209ENST00000600310 OR2T6Q8NHC8 308 aa15.37■□□□□ 0.05
UPF1-209ENST00000600310 SDHCQ99643 169 aaPredicted RBP15.37■□□□□ 0.05
UPF1-209ENST00000600310 LIN7CQ9NUP9 197 aaKnown RBP15.37■□□□□ 0.05
UPF1-209ENST00000600310 PRELID3BQ9Y3B1 194 aa15.37■□□□□ 0.05
UPF1-209ENST00000600310 DISC1C4P0D8 188 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 GPR31O00270 319 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 NBR2O15453 112 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 TNFSF12O43508 249 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 NDUFA3O95167 84 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 CNTFRP26992 372 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 AP3S2P59780 193 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 RPS16P62249 146 aaKnown RBP15.36■□□□□ 0.05
UPF1-209ENST00000600310 CBX3Q13185 183 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 FAM71E2Q8N5Q1 922 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 TERB2Q8NHR7 220 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms