RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 PSMB11A5LHX3 300 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 A6NHS1 94 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 LINC00473A8K010 186 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 ADARB2-AS1A8MUL3 147 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 RRHO14718 337 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 RBBP9O75884 186 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 IGLV2-14P01704 120 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 PMP2P02689 132 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 NAT1P18440 290 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 DUTP33316 252 aaKnown RBP11.99□□□□□ -0.49
LIG1-219ENST00000600055 THBS3P49746 956 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 RPS16P62249 146 aaKnown RBP11.99□□□□□ -0.49
LIG1-219ENST00000600055 CDK10Q15131 360 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 RNASE12Q5GAN4 147 aaKnown RBP11.99□□□□□ -0.49
LIG1-219ENST00000600055 TREML4Q6UXN2 200 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 PDPNQ86YL7 162 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 FOXRED2Q8IWF2 684 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 LAX1Q8IWV1 398 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 STPG2Q8N412 459 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 ZNF645Q8N7E2 425 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 BVESQ8NE79 360 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 KIAA1456Q9P272 454 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 EXTL2Q9UBQ6 330 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 ADAM30Q9UKF2 790 aa11.99□□□□□ -0.49
LIG1-219ENST00000600055 A0A1W2PRX2 142 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 AP4M1O00189 453 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 FCN1O00602 326 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 RGS5O15539 181 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 CSF1P09603 554 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 RFX2P48378 723 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 CD83Q01151 205 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 PSG5Q15238 335 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 C2orf68Q2NKX9 166 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 LIN54Q6MZP7 749 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 LYSMD2Q8IV50 215 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 FAM110DQ8TAY7 271 aaPredicted RBP11.98□□□□□ -0.49
LIG1-219ENST00000600055 CHPT1Q8WUD6 406 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 SECTM1Q8WVN6 248 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 DDB2Q92466 427 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 FLYWCH2Q96CP2 140 aaKnown RBP11.98□□□□□ -0.49
LIG1-219ENST00000600055 EHFQ9NZC4 300 aa11.98□□□□□ -0.49
LIG1-219ENST00000600055 RBMX2Q9Y388 322 aaKnown RBP11.98□□□□□ -0.49
LIG1-219ENST00000600055 IGHV7-81A0A0B4J1V7 117 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 TCRBV4S1A1TA0A5B7 111 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 KCNAB3O43448 404 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 PPYP01298 95 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 HLA-DRB1P01911 266 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 HLA-DMAP28067 261 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 FXYD4P59646 89 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 RPL30P62888 115 aaKnown RBP11.97□□□□□ -0.49
LIG1-219ENST00000600055 PLGLAQ15195 96 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 NDUFA11Q86Y39 141 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 OR4X2Q8NGF9 303 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 GIMAP1Q8WWP7 306 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 CLCC1Q96S66 551 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 ABHD1Q96SE0 405 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 GPHA2Q96T91 129 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 RNF5Q99942 180 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 SCPEP1Q9HB40 452 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 CCL28Q9NRJ3 127 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 TPSG1Q9NRR2 321 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 METTL1Q9UBP6 276 aaKnown RBP11.97□□□□□ -0.49
LIG1-219ENST00000600055 A3GALT2U3KPV4 340 aa11.97□□□□□ -0.49
LIG1-219ENST00000600055 TET2Q6N021 2002 aaPredicted RBP11.96□□□□□ -0.49
LIG1-219ENST00000600055 IGLV2-23P01705 113 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 NDPQ00604 133 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 EIF4EBP1Q13541 118 aaPredicted RBP11.96□□□□□ -0.49
LIG1-219ENST00000600055 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 OVCH2Q7RTZ1 564 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 OR5H2Q8NGV7 314 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 ADTRPQ96IZ2 230 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 TSNAXQ99598 290 aaKnown RBP11.96□□□□□ -0.49
LIG1-219ENST00000600055 SLIRPQ9GZT3 109 aaKnown RBP11.96□□□□□ -0.49
LIG1-219ENST00000600055 SLC5A7Q9GZV3 580 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 MMP27Q9H306 513 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 OR51J1Q9H342 316 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 PARP11Q9NR21 331 aa11.96□□□□□ -0.49
LIG1-219ENST00000600055 SRRM4A7MD48 611 aaKnown RBP11.95□□□□□ -0.5
LIG1-219ENST00000600055 SULT1C2O00338 296 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 ATP6V0E1O15342 81 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 TNFSF12O43508 249 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 SLC25A17O43808 307 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 SLC22A5O76082 557 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 CRYZL1O95825 349 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 S100A5P33763 92 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 HRH1P35367 487 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 TAS2R46P59540 309 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 SLC35B1P78383 322 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 TAGLNQ01995 201 aaKnown RBP11.95□□□□□ -0.5
LIG1-219ENST00000600055 DYRK1AQ13627 763 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 RTL8BQ17RB0 113 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 TMEM177Q53S58 311 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 KHDC1LQ5JSQ8 128 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 ZNF660Q6AZW8 331 aaPredicted RBP11.95□□□□□ -0.5
LIG1-219ENST00000600055 LCNL1Q6ZST4 164 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 TMEM17Q86X19 198 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 OR52I2Q8NH67 350 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 MCFD2Q8NI22 146 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 C15orf40Q8WUR7 153 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 HARBI1Q96MB7 349 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms