RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 LUMP51884 338 aaPredicted RBP17.89■□□□□ 0.45
IRF3-220ENST00000598108 RPS16P62249 146 aaKnown RBP17.89■□□□□ 0.45
IRF3-220ENST00000598108 LCNL1Q6ZST4 164 aa17.89■□□□□ 0.45
IRF3-220ENST00000598108 WSB1Q9Y6I7 421 aa17.89■□□□□ 0.45
IRF3-220ENST00000598108 G3V318 75 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 ATP6V0E1O15342 81 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 IGLV2-14P01704 120 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 DUTP33316 252 aaKnown RBP17.88■□□□□ 0.45
IRF3-220ENST00000598108 RPL23AP62750 156 aaKnown RBP17.88■□□□□ 0.45
IRF3-220ENST00000598108 CX3CL1P78423 397 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 NDPQ00604 133 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 TEX38Q6PEX7 206 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 COMMD1Q8N668 190 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 BVESQ8NE79 360 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 DDB2Q92466 427 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 FLYWCH2Q96CP2 140 aaKnown RBP17.88■□□□□ 0.45
IRF3-220ENST00000598108 PARP11Q9NR21 331 aa17.88■□□□□ 0.45
IRF3-220ENST00000598108 NOTCH1P46531 2555 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 LINC00473A8K010 186 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 HPGDSO60760 199 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 VDAC1P21796 283 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 CBX5P45973 191 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 THBS3P49746 956 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 ARPC4P59998 168 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 ZNF645Q8N7E2 425 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 ACOT12Q8WYK0 555 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 CLCC1Q96S66 551 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 TSNAXQ99598 290 aaKnown RBP17.87■□□□□ 0.45
IRF3-220ENST00000598108 GON7Q9BXV9 100 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 TPSG1Q9NRR2 321 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 METTL1Q9UBP6 276 aaKnown RBP17.87■□□□□ 0.45
IRF3-220ENST00000598108 ZNF580Q9UK33 172 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 FBXO7Q9Y3I1 522 aa17.87■□□□□ 0.45
IRF3-220ENST00000598108 SRRM4A7MD48 611 aaKnown RBP17.86■□□□□ 0.45
IRF3-220ENST00000598108 IGLV2-23P01705 113 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 IGHG4P01861 327 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 APOA1P02647 267 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 RPLP1P05386 114 aaKnown RBP17.86■□□□□ 0.45
IRF3-220ENST00000598108 EGR2P11161 476 aaPredicted RBP17.86■□□□□ 0.45
IRF3-220ENST00000598108 ELK1P19419 428 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 FCGR2CP31995 323 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 PLGLAQ15195 96 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 ZNF660Q6AZW8 331 aaPredicted RBP17.86■□□□□ 0.45
IRF3-220ENST00000598108 C1QL4Q86Z23 238 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 CMTM3Q96MX0 182 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 ZFP57Q9NU63 452 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 ANAPC10Q9UM13 185 aa17.86■□□□□ 0.45
IRF3-220ENST00000598108 RBMX2Q9Y388 322 aaKnown RBP17.86■□□□□ 0.45
IRF3-220ENST00000598108 OR5H8P0DN80 308 aa17.85■□□□□ 0.45
IRF3-220ENST00000598108 PF4V1P10720 104 aa17.85■□□□□ 0.45
IRF3-220ENST00000598108 ZNF182P17025 639 aaPredicted RBP17.85■□□□□ 0.45
IRF3-220ENST00000598108 AADACP22760 399 aa17.85■□□□□ 0.45
IRF3-220ENST00000598108 PPIFP30405 207 aaKnown RBP17.85■□□□□ 0.45
IRF3-220ENST00000598108 FOXE3Q13461 319 aa17.85■□□□□ 0.45
IRF3-220ENST00000598108 SPCS2Q15005 226 aa17.85■□□□□ 0.45
IRF3-220ENST00000598108 CLVS1Q8IUQ0 354 aaPredicted RBP17.85■□□□□ 0.45
IRF3-220ENST00000598108 RNF152Q8N8N0 203 aa17.85■□□□□ 0.45
IRF3-220ENST00000598108 NECAP2Q9NVZ3 263 aa17.85■□□□□ 0.45
IRF3-220ENST00000598108 MRPS7Q9Y2R9 242 aaKnown RBP17.85■□□□□ 0.45
IRF3-220ENST00000598108 NOTCH3Q9UM47 2321 aa17.84■□□□□ 0.45
IRF3-220ENST00000598108 G3V4G9 280 aa17.84■□□□□ 0.45
IRF3-220ENST00000598108 SLC25A17O43808 307 aa17.84■□□□□ 0.45
IRF3-220ENST00000598108 CRYGBP07316 175 aa17.84■□□□□ 0.45
IRF3-220ENST00000598108 ELANEP08246 267 aa17.84■□□□□ 0.45
IRF3-220ENST00000598108 RPL30P62888 115 aaKnown RBP17.84■□□□□ 0.45
IRF3-220ENST00000598108 TAGLNQ01995 201 aaKnown RBP17.84■□□□□ 0.45
IRF3-220ENST00000598108 TMEM177Q53S58 311 aa17.84■□□□□ 0.45
IRF3-220ENST00000598108 OR5AP2Q8NGF4 316 aa17.84■□□□□ 0.45
IRF3-220ENST00000598108 ADTRPQ96IZ2 230 aa17.84■□□□□ 0.45
IRF3-220ENST00000598108 IFT46Q9NQC8 304 aa17.84■□□□□ 0.45
IRF3-220ENST00000598108 TRAV41A0A0B4J266 112 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 SPDEFO95238 335 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 PRSS3P35030 304 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 LGALS7P47929 136 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 DEFA6Q01524 100 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 PJVKQ0ZLH3 352 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 EIF4EBP1Q13541 118 aaPredicted RBP17.83■□□□□ 0.44
IRF3-220ENST00000598108 RTL8BQ17RB0 113 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 C19orf54Q5BKX5 351 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 CXorf66Q5JRM2 361 aaPredicted RBP17.83■□□□□ 0.44
IRF3-220ENST00000598108 ZNF562Q6V9R5 426 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 ETV3LQ6ZN32 361 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 C8orf86Q6ZUL3 223 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 WFDC9Q8NEX5 89 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 HARBI1Q96MB7 349 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 KLK15Q9H2R5 256 aa17.83■□□□□ 0.44
IRF3-220ENST00000598108 SMIM31A0A1B0GVY4 71 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 PLXNB1O43157 2135 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 SLC22A5O76082 557 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 CA2P00918 260 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 RRASP10301 218 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 NAT1P18440 290 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 PSMB8P28062 276 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 RPL5P46777 297 aaKnown RBP17.82■□□□□ 0.44
IRF3-220ENST00000598108 CDK10Q15131 360 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 MZT2AQ6P582 158 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 SNX29P2Q8IUI4 249 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 LYSMD2Q8IV50 215 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 MINDY2Q8NBR6 621 aa17.82■□□□□ 0.44
IRF3-220ENST00000598108 GPX8Q8TED1 209 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms