RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 BEST4Q8NFU0 473 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 DDB2Q92466 427 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 SNAPC3Q92966 411 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 KCTD12Q96CX2 325 aaKnown RBP8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 OR51J1Q9H342 316 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 DIABLOQ9NR28 239 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 TPSG1Q9NRR2 321 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 OR2W1Q9Y3N9 320 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 MEIS3P1A6NDR6 274 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 G3V318 75 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 J3QRK9 145 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 WIPF1O43516 503 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 IGHG4P01861 327 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 APOA2P02652 100 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 RPLP1P05386 114 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 FCER2P06734 321 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 CTXN2P0C2S0 81 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 EGR2P11161 476 aaPredicted RBP8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 PPIFP30405 207 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 DUTP33316 252 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 TAS2R20P59543 309 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 SSBP2P81877 361 aaPredicted RBP8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 DEFA6Q01524 100 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 SAMD5Q5TGI4 173 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 TEX38Q6PEX7 206 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 COMMD1Q8N668 190 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 S100A16Q96FQ6 103 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 RNF5Q99942 180 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 PARP11Q9NR21 331 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 SLC35D1Q9NTN3 355 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 KIAA1456Q9P272 454 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 ANAPC10Q9UM13 185 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 WSB1Q9Y6I7 421 aa8.6□□□□□ -1.03
SHKBP1-206ENST00000595523 SLC25A17O43808 307 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 SPDEFO95238 335 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 IGLV1-40P01703 118 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 CRYGBP07316 175 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 PF4V1P10720 104 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 PSMB8P28062 276 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 THBS3P49746 956 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 LUMP51884 338 aaPredicted RBP8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 CRIP2P52943 208 aaPredicted RBP8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 CX3CL1P78423 397 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 FOXE3Q13461 319 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 EIF4EBP1Q13541 118 aaPredicted RBP8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 MRGPRG-AS1Q2M3A8 158 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 TMEM177Q53S58 311 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 TMEM69Q5SWH9 247 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 C8orf86Q6ZUL3 223 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 ZNF645Q8N7E2 425 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 BVESQ8NE79 360 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 WFDC9Q8NEX5 89 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 MYOZ3Q8TDC0 251 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 FLYWCH2Q96CP2 140 aaKnown RBP8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 GON7Q9BXV9 100 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 COMMD3Q9UBI1 195 aa8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 METTL1Q9UBP6 276 aaKnown RBP8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 RBM7Q9Y580 266 aaKnown RBP8.59□□□□□ -1.03
SHKBP1-206ENST00000595523 TRAV41A0A0B4J266 112 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 SRRM4A7MD48 611 aaKnown RBP8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 SOX15O60248 233 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 HPGDSO60760 199 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 CA2P00918 260 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 APOA1P02647 267 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 ELANEP08246 267 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 ELK1P19419 428 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 VDAC1P21796 283 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 AADACP22760 399 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 ARPC4P59998 168 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 RPS16P62249 146 aaKnown RBP8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 RPL30P62888 115 aaKnown RBP8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 PJVKQ0ZLH3 352 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 KIAA0141Q14154 515 aaPredicted RBP8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 PLGLAQ15195 96 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 BEAN1Q3B7T3 259 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 KPRPQ5T749 579 aaPredicted RBP8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 ZNF660Q6AZW8 331 aaPredicted RBP8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 GPR141Q7Z602 305 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 LINC00482Q8N8I6 264 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 MINDY2Q8NBR6 621 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 KLHL30-AS1Q8NEE0 82 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 CLCC1Q96S66 551 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 TSNAXQ99598 290 aaKnown RBP8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 FAM103A1Q9BTL3 118 aaKnown RBP8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 KLK15Q9H2R5 256 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 ZFP57Q9NU63 452 aa8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 RBMX2Q9Y388 322 aaKnown RBP8.58□□□□□ -1.04
SHKBP1-206ENST00000595523 ARPC1BO15143 372 aaKnown RBP8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 PF4P02776 101 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 OR5H8P0DN80 308 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 NAT1P18440 290 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 FCGR2CP31995 323 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 CBX5P45973 191 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 LGALS7P47929 136 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 RORCP51449 518 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 BRWD1-AS2P59051 145 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 TAGLNQ01995 201 aaKnown RBP8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 SPCS2Q15005 226 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 RTL8BQ17RB0 113 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms