RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SGMS2Q8NHU3 365 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 FCAMRQ8WWV6 532 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 BORCS5Q969J3 196 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 MMP27Q9H306 513 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 SLC35D1Q9NTN3 355 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 RBMX2Q9Y388 322 aaKnown RBP20.43■□□□□ 0.86
TRIM28-204ENST00000594806 IGKV1D-13A0A0B4J2D9 117 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 IGKV1-13P0DP09 117 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 AADACP22760 399 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 DUTP33316 252 aaKnown RBP20.42■□□□□ 0.86
TRIM28-204ENST00000594806 KRTAP10-3P60369 221 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 SSBP1Q04837 148 aaKnown RBP20.42■□□□□ 0.86
TRIM28-204ENST00000594806 RTL8BQ17RB0 113 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 ACTBL2Q562R1 376 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 SLC35E3Q7Z769 313 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 FOXRED2Q8IWF2 684 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 WIPF2Q8TF74 440 aaPredicted RBP20.42■□□□□ 0.86
TRIM28-204ENST00000594806 FLYWCH2Q96CP2 140 aaKnown RBP20.42■□□□□ 0.86
TRIM28-204ENST00000594806 DGCR14Q96DF8 476 aaKnown RBP20.42■□□□□ 0.86
TRIM28-204ENST00000594806 C5orf30Q96GV9 206 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 TSNAXQ99598 290 aaKnown RBP20.42■□□□□ 0.86
TRIM28-204ENST00000594806 HSD17B10Q99714 261 aaKnown RBP20.42■□□□□ 0.86
TRIM28-204ENST00000594806 ANK2Q01484 3957 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 DNHD1Q96M86 4753 aa20.42■□□□□ 0.86
TRIM28-204ENST00000594806 SH2D7A6NKC9 451 aaPredicted RBP20.41■□□□□ 0.86
TRIM28-204ENST00000594806 GABARAPH6UMI1 98 aa20.41■□□□□ 0.86
TRIM28-204ENST00000594806 J3QRK9 145 aa20.41■□□□□ 0.86
TRIM28-204ENST00000594806 PMP2P02689 132 aa20.41■□□□□ 0.86
TRIM28-204ENST00000594806 RFX2P48378 723 aa20.41■□□□□ 0.86
TRIM28-204ENST00000594806 RITA1Q96K30 269 aa20.41■□□□□ 0.86
TRIM28-204ENST00000594806 MTFP1Q9UDX5 166 aa20.41■□□□□ 0.86
TRIM28-204ENST00000594806 CTDSPLO15194 276 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 SPDEFO95238 335 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 TBPP20226 339 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 HLA-DMAP28067 261 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 HRH1P35367 487 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 LGALS7P47929 136 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 HERV-K104P61576 105 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 C5orf64Q2M2E5 130 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 TMEM95Q3KNT9 176 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 ZNF660Q6AZW8 331 aaPredicted RBP20.4■□□□□ 0.86
TRIM28-204ENST00000594806 CENPVQ7Z7K6 275 aaPredicted RBP20.4■□□□□ 0.86
TRIM28-204ENST00000594806 OR6F1Q8NGZ6 308 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 CHPT1Q8WUD6 406 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 DDB2Q92466 427 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 DCUN1D5Q9BTE7 237 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 ZNF107Q9UII5 783 aaPredicted RBP20.4■□□□□ 0.86
TRIM28-204ENST00000594806 PRELID3BQ9Y3B1 194 aa20.4■□□□□ 0.86
TRIM28-204ENST00000594806 RRHO14718 337 aa20.39■□□□□ 0.85
TRIM28-204ENST00000594806 IGLV2-14P01704 120 aa20.39■□□□□ 0.85
TRIM28-204ENST00000594806 HLA-DRB1P01911 266 aa20.39■□□□□ 0.85
TRIM28-204ENST00000594806 RPS16P62249 146 aaKnown RBP20.39■□□□□ 0.85
TRIM28-204ENST00000594806 SRSF4Q08170 494 aaKnown RBP20.39■□□□□ 0.85
TRIM28-204ENST00000594806 IL18Q14116 193 aa20.39■□□□□ 0.85
TRIM28-204ENST00000594806 LIN54Q6MZP7 749 aa20.39■□□□□ 0.85
TRIM28-204ENST00000594806 ZNF66Q6ZN08 573 aa20.39■□□□□ 0.85
TRIM28-204ENST00000594806 OR52I2Q8NH67 350 aa20.39■□□□□ 0.85
TRIM28-204ENST00000594806 SECTM1Q8WVN6 248 aa20.39■□□□□ 0.85
TRIM28-204ENST00000594806 AP4M1O00189 453 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 IGKV1-16P04430 117 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 CNTFRP26992 372 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 TNFSF8P32971 234 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 LINC00205P59089 165 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 VAX1Q5SQQ9 334 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 MOB3AQ96BX8 217 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 ZNF2Q9BSG1 426 aaPredicted RBP20.38■□□□□ 0.85
TRIM28-204ENST00000594806 GON7Q9BXV9 100 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 SLC5A7Q9GZV3 580 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 KLK11Q9UBX7 282 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 ZNF580Q9UK33 172 aa20.38■□□□□ 0.85
TRIM28-204ENST00000594806 S100A5P33763 92 aa20.37■□□□□ 0.85
TRIM28-204ENST00000594806 TSPAN5P62079 268 aa20.37■□□□□ 0.85
TRIM28-204ENST00000594806 TMEM177Q53S58 311 aa20.37■□□□□ 0.85
TRIM28-204ENST00000594806 BVESQ8NE79 360 aa20.37■□□□□ 0.85
TRIM28-204ENST00000594806 SMIM4Q8WVI0 70 aa20.37■□□□□ 0.85
TRIM28-204ENST00000594806 TET2Q6N021 2002 aaPredicted RBP20.36■□□□□ 0.85
TRIM28-204ENST00000594806 LINC00473A8K010 186 aa20.36■□□□□ 0.85
TRIM28-204ENST00000594806 FBXO24O75426 580 aa20.36■□□□□ 0.85
TRIM28-204ENST00000594806 FXYD4P59646 89 aa20.36■□□□□ 0.85
TRIM28-204ENST00000594806 EIF4EBP1Q13541 118 aaPredicted RBP20.36■□□□□ 0.85
TRIM28-204ENST00000594806 KCTD9Q7L273 389 aa20.36■□□□□ 0.85
TRIM28-204ENST00000594806 OR5AU1Q8NGC0 362 aa20.36■□□□□ 0.85
TRIM28-204ENST00000594806 RBMXL1Q96E39 390 aaKnown RBP20.36■□□□□ 0.85
TRIM28-204ENST00000594806 SOSTQ9BQB4 213 aa20.36■□□□□ 0.85
TRIM28-204ENST00000594806 CCL28Q9NRJ3 127 aa20.36■□□□□ 0.85
TRIM28-204ENST00000594806 FABP12A6NFH5 140 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 TAS2R19P59542 299 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 SLC35B1P78383 322 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 PLGLAQ15195 96 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 PSG5Q15238 335 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 LPCAT3Q6P1A2 487 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 TMEM17Q86X19 198 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 STPG2Q8N412 459 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 MFSD4AQ8N468 514 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 TMEM229BQ8NBD8 167 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 OSR1Q8TAX0 266 aaPredicted RBP20.35■□□□□ 0.85
TRIM28-204ENST00000594806 TAS2R8Q9NYW2 309 aa20.35■□□□□ 0.85
TRIM28-204ENST00000594806 PSMB11A5LHX3 300 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 DPPA5A6NC42 116 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 M0QZ24 198 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms