RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 HSD17B12Q53GQ0 312 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 C8orf59Q8N0T1 100 aaPredicted RBP12.47□□□□□ -0.41
LIG1-205ENST00000593425 MS4A15Q8N5U1 240 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 PACRGLQ8N7B6 248 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 OR6M1Q8NGM8 313 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 OR9G4Q8NGQ1 327 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 GFI1Q99684 422 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 THAP7Q9BT49 309 aaPredicted RBP12.47□□□□□ -0.41
LIG1-205ENST00000593425 ZNF221Q9UK13 617 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 TRBV12-3P01733 135 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 APOA2P02652 100 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 TMEM50BP56557 158 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 SYNJ2BPP57105 145 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 P2RY14Q15391 338 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 CEACAM19Q7Z692 300 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 FAM89BQ8N5H3 189 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 C12orf4Q9NQ89 552 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 C8orf4Q9NR00 106 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 SLC35D1Q9NTN3 355 aa12.46□□□□□ -0.41
LIG1-205ENST00000593425 A0A0G2JLM5 398 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 M0R1X1 148 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 CNIH1O95406 144 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 CRYGBP07316 175 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 UCHL1P09936 223 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 ARHGAP5-AS1Q96IT6 56 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 URM1Q9BTM9 101 aaKnown RBP12.45□□□□□ -0.42
LIG1-205ENST00000593425 MND1Q9BWT6 205 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 PECRQ9BY49 303 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 RDH8Q9NYR8 311 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 HSF4Q9ULV5 492 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 MGAT4AQ9UM21 535 aa12.45□□□□□ -0.42
LIG1-205ENST00000593425 LSM2Q9Y333 95 aaKnown RBP12.45□□□□□ -0.42
LIG1-205ENST00000593425 IZUMO1RA6ND01 250 aa12.44□□□□□ -0.42
LIG1-205ENST00000593425 H0Y980 276 aa12.44□□□□□ -0.42
LIG1-205ENST00000593425 RBMXL2O75526 392 aaKnown RBP12.44□□□□□ -0.42
LIG1-205ENST00000593425 CDK1P06493 297 aa12.44□□□□□ -0.42
LIG1-205ENST00000593425 DYRK1AQ13627 763 aa12.44□□□□□ -0.42
LIG1-205ENST00000593425 MOGAT2Q3SYC2 334 aa12.44□□□□□ -0.42
LIG1-205ENST00000593425 C5orf30Q96GV9 206 aa12.44□□□□□ -0.42
LIG1-205ENST00000593425 CMSS1Q9BQ75 279 aaKnown RBP12.44□□□□□ -0.42
LIG1-205ENST00000593425 TINAGL1Q9GZM7 467 aaPredicted RBP12.44□□□□□ -0.42
LIG1-205ENST00000593425 PEF1Q9UBV8 284 aaKnown RBP12.44□□□□□ -0.42
LIG1-205ENST00000593425 SLC17A2O00624 439 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 CSN3P07498 182 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 CD3GP09693 182 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 APELAP0DMC3 54 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 MRGPRG-AS1Q2M3A8 158 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 PLAC9Q5JTB6 97 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 RNLSQ5VYX0 342 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 ZNF343Q6P1L6 599 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.43□□□□□ -0.42
LIG1-205ENST00000593425 BVESQ8NE79 360 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 HARBI1Q96MB7 349 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 OR2D2Q9H210 308 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 PLGRKTQ9HBL7 147 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 RETNQ9HD89 108 aa12.43□□□□□ -0.42
LIG1-205ENST00000593425 AK6Q9Y3D8 172 aaKnown RBP12.43□□□□□ -0.42
LIG1-205ENST00000593425 TRDCB7Z8K6 153 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 BRI3O95415 125 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 AADACP22760 399 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 CLDN12P56749 244 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 SPHARQ15513 63 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 MED22Q15528 200 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 TMEM91Q6ZNR0 172 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 GTSCR1Q86UQ5 136 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 TMEM203Q969S6 136 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 TMEM68Q96MH6 324 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 TUBA4BQ9H853 241 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 SDHAF2Q9NX18 166 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 COA4Q9NYJ1 87 aa12.42□□□□□ -0.42
LIG1-205ENST00000593425 SRRM4A7MD48 611 aaKnown RBP12.41□□□□□ -0.42
LIG1-205ENST00000593425 LGALS7P47929 136 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 PLA2G7Q13093 441 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 RCN1Q15293 331 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 TMEM177Q53S58 311 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 IGSF11Q5DX21 431 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 LIPKQ5VXJ0 399 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 LCN12Q6JVE5 192 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 Q8N402 240 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 OR4A4PQ8NGN8 299 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 FAM110AQ9BQ89 295 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 SIGLEC8Q9NYZ4 499 aa12.41□□□□□ -0.42
LIG1-205ENST00000593425 PTGES3LE9PB15 166 aa12.4□□□□□ -0.42
LIG1-205ENST00000593425 SHOXO15266 292 aa12.4□□□□□ -0.42
LIG1-205ENST00000593425 FABP7O15540 132 aa12.4□□□□□ -0.42
LIG1-205ENST00000593425 IFNA6P05013 189 aa12.4□□□□□ -0.42
LIG1-205ENST00000593425 MECP2P51608 486 aaKnown RBP12.4□□□□□ -0.42
LIG1-205ENST00000593425 RPS25P62851 125 aaKnown RBP12.4□□□□□ -0.42
LIG1-205ENST00000593425 RAB11BQ15907 218 aa12.4□□□□□ -0.42
LIG1-205ENST00000593425 RPEL1Q2QD12 228 aa12.4□□□□□ -0.42
LIG1-205ENST00000593425 CABLES2Q9BTV7 478 aa12.4□□□□□ -0.42
LIG1-205ENST00000593425 PLEKHA3Q9HB20 300 aa12.4□□□□□ -0.42
LIG1-205ENST00000593425 KCNK7Q9Y2U2 307 aa12.4□□□□□ -0.42
LIG1-205ENST00000593425 PLECQ15149 4684 aaKnown RBP12.4□□□□□ -0.42
LIG1-205ENST00000593425 MSGN1A6NI15 193 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 EBAG9O00559 213 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 BET1O15155 118 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 OR2A4O95047 310 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 GSTT2P0CG29 244 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 GSTT2BP0CG30 244 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms