RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PRR13Q9NZ81 148 aa10.99□□□□□ -0.65
VMP1-217ENST00000593168 ABCA1O95477 2261 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 IGHV4-61A0A0C4DH41 118 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 A0A1W2PPE3 182 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 DUXBA0A1W2PPF3 345 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 CD5LO43866 347 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 SIX6O95475 246 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 IFNA21P01568 189 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 PRTN3P24158 256 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 DUTP33316 252 aaKnown RBP10.98□□□□□ -0.65
VMP1-217ENST00000593168 H2BFSP57053 126 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 RPL30P62888 115 aaKnown RBP10.98□□□□□ -0.65
VMP1-217ENST00000593168 PAX2Q02962 417 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 DCAF12L2Q5VW00 463 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 GSG1LQ6UXU4 331 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 ODF3L1Q8IXM7 274 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 LYG1Q8N1E2 194 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 ABHD12Q8N2K0 398 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 S1PR3Q99500 378 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 ZNF251Q9BRH9 671 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 METTL8Q9H825 291 aaKnown RBP10.98□□□□□ -0.65
VMP1-217ENST00000593168 ONECUT1Q9UBC0 465 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 TMED3Q9Y3Q3 217 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 KPTNQ9Y664 436 aa10.98□□□□□ -0.65
VMP1-217ENST00000593168 SAA2-SAA4A0A096LPE2 208 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 IGHV2-70DA0A0C4DH43 119 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 M0R1X1 148 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 TOR1AO14656 332 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 ADAP1O75689 374 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 SERPINE2P07093 398 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 HOXB5P09067 269 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 SAA2P0DJI9 122 aaPredicted RBP10.97□□□□□ -0.65
VMP1-217ENST00000593168 RPA2P15927 270 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 ZNF137PP52743 207 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 PRRX1P54821 245 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 ARF6P62330 175 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 TMEM268Q5VZI3 342 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 FAM71F2Q6NXP2 309 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 ZNF695Q8IW36 515 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 SELENOHQ8IZQ5 122 aaKnown RBP10.97□□□□□ -0.65
VMP1-217ENST00000593168 Q8N7P7 452 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 LHFPL5Q8TAF8 219 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 RBPMSQ93062 196 aaKnown RBP10.97□□□□□ -0.65
VMP1-217ENST00000593168 TMEM186Q96B77 213 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 ADTRPQ96IZ2 230 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 CHIAQ9BZP6 476 aa10.97□□□□□ -0.65
VMP1-217ENST00000593168 UNKLQ9H9P5 680 aaKnown RBP10.97□□□□□ -0.65
VMP1-217ENST00000593168 ARHGAP32A7KAX9 2087 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 IGHV2-26A0A0B4J1V2 119 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 LINC00473A8K010 186 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 BOLA2-SMG1P6H3BVE0 249 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 CCSO14618 274 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 IGLV1-47P01700 117 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 C1QBP02746 253 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 ZNF16P17020 682 aaPredicted RBP10.96□□□□□ -0.65
VMP1-217ENST00000593168 THBS3P49746 956 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 LCN2P80188 198 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 CYCSP99999 105 aaKnown RBP10.96□□□□□ -0.65
VMP1-217ENST00000593168 ZFP69Q49AA0 526 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 ZNF585BQ52M93 769 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 RPL39P5Q59GN2 51 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 GGNBP1Q5YKI7 109 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 BTNL3Q6UXE8 466 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 C1orf229Q6ZS94 237 aaPredicted RBP10.96□□□□□ -0.65
VMP1-217ENST00000593168 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 LYZL2Q7Z4W2 148 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 BEND2Q8NDZ0 799 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 OR13D1Q8NGV5 346 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 OR2T35Q8NGX2 323 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 CD300LFQ8TDQ1 290 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 TCTEX1D2Q8WW35 142 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 C2orf50Q96LR7 162 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 PDCD10Q9BUL8 212 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 CLEC7AQ9BXN2 247 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 NMES1Q9C002 83 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 HEXA-AS1Q9H8Q6 139 aa10.96□□□□□ -0.65
VMP1-217ENST00000593168 C13orf42A0A1B0GVH6 325 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 C5orf51A6NDU8 294 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 FAM25EA8MYX2 175 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 FAM157AC9JC47 383 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 RBFOX2O43251 390 aaKnown RBP eCLIP10.95□□□□□ -0.66
VMP1-217ENST00000593168 VDAC1P21796 283 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 USF1P22415 310 aaPredicted RBP10.95□□□□□ -0.66
VMP1-217ENST00000593168 IL3RAP26951 378 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 KIR2DS2P43631 304 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 GZMKP49863 264 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 BRWD1-AS2P59051 145 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 NCR3LG1Q68D85 454 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 SPAG16Q8N0X2 631 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 SLC35G3Q8N808 338 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 OR11H6Q8NGC7 330 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 OR10X1Q8NGY0 326 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 DDB2Q92466 427 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 ST6GALNAC6Q969X2 333 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 SEC22AQ96IW7 307 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 RANBP3Q9H6Z4 567 aaPredicted RBP10.95□□□□□ -0.66
VMP1-217ENST00000593168 MMP26Q9NRE1 261 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 PRELID3BQ9Y3B1 194 aa10.95□□□□□ -0.66
VMP1-217ENST00000593168 LPAR6P43657 344 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 DVL1P1P54792 670 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms