RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SPNP16150 400 aa14.53□□□□□ -0.08
CCDC43-205ENST00000592333 ZP3P21754 424 aa14.53□□□□□ -0.08
CCDC43-205ENST00000592333 TPPP2P59282 170 aa14.53□□□□□ -0.08
CCDC43-205ENST00000592333 MRPS15P82914 257 aaKnown RBP14.53□□□□□ -0.08
CCDC43-205ENST00000592333 C2orf76Q3KRA6 126 aa14.53□□□□□ -0.08
CCDC43-205ENST00000592333 PRSS48Q7RTY5 328 aa14.53□□□□□ -0.08
CCDC43-205ENST00000592333 ASCL2Q99929 193 aa14.53□□□□□ -0.08
CCDC43-205ENST00000592333 RANGRFQ9HD47 186 aaPredicted RBP14.53□□□□□ -0.08
CCDC43-205ENST00000592333 A3GALT2U3KPV4 340 aa14.53□□□□□ -0.08
CCDC43-205ENST00000592333 RYR3Q15413 4870 aa14.53□□□□□ -0.08
CCDC43-205ENST00000592333 IGKV1-6A0A0C4DH72 117 aa14.52□□□□□ -0.09
CCDC43-205ENST00000592333 DENRO43583 198 aaKnown RBP14.52□□□□□ -0.09
CCDC43-205ENST00000592333 HSMCR30P0CW71 290 aa14.52□□□□□ -0.09
CCDC43-205ENST00000592333 FXYD3Q14802 87 aa14.52□□□□□ -0.09
CCDC43-205ENST00000592333 SRSF7Q16629 238 aaKnown RBP eCLIP14.52□□□□□ -0.09
CCDC43-205ENST00000592333 POC5Q8NA72 575 aa14.52□□□□□ -0.09
CCDC43-205ENST00000592333 DRAXINQ8NBI3 349 aaPredicted RBP14.52□□□□□ -0.09
CCDC43-205ENST00000592333 FAM103A1Q9BTL3 118 aaKnown RBP14.52□□□□□ -0.09
CCDC43-205ENST00000592333 STUB1Q9UNE7 303 aa14.52□□□□□ -0.09
CCDC43-205ENST00000592333 A8MZ25 164 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 TRGV3P03979 118 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 RRASP10301 218 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 CALRP27797 417 aaKnown RBP14.51□□□□□ -0.09
CCDC43-205ENST00000592333 RPS25P62851 125 aaKnown RBP14.51□□□□□ -0.09
CCDC43-205ENST00000592333 CBX3Q13185 183 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 PLAC9Q5JTB6 97 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 RAB3CQ96E17 227 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 CLCC1Q96S66 551 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 MGLLQ99685 303 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 CABLES2Q9BTV7 478 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 SLC35D1Q9NTN3 355 aa14.51□□□□□ -0.09
CCDC43-205ENST00000592333 TRBV6-7A0A0A0MS04 114 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 C13orf42A0A1B0GVH6 325 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 M0R1X1 148 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 PDCD5O14737 125 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 FABP7O15540 132 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 SLC25A17O43808 307 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 CD3GP09693 182 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 AADACP22760 399 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 CRHBPP24387 322 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 GADD45AP24522 165 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 FABP5Q01469 135 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 ARL6IP1Q15041 203 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 Q6ZS49 121 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 SBSPONQ8IVN8 264 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 OR10J5Q8NHC4 309 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 CASTOR1Q8WTX7 329 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 MS4A10Q96PG2 267 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 ZMAT4Q9H898 229 aa14.5□□□□□ -0.09
CCDC43-205ENST00000592333 TRAV1-2A0A0B4J238 106 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 CNIH1O95406 144 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 IGLV1-51P01701 117 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 IGHV3-11P01762 117 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 CRYGBP07316 175 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 FRMD6-AS1P0C7T7 363 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 AQP4P55087 323 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 TMEM177Q53S58 311 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 MUC7Q8TAX7 377 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 ADTRPQ96IZ2 230 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 RCHY1Q96PM5 261 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 KCNK7Q9Y2U2 307 aa14.49□□□□□ -0.09
CCDC43-205ENST00000592333 TMEM272A0A1B0GTI8 110 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 IGLV2-23P01705 113 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 FCGR3AP08637 254 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 RAB6AP20340 208 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 GALP22466 123 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 CLDN12P56749 244 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 RTL8BQ17RB0 113 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 OR10R2Q8NGX6 335 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 GRPEL2Q8TAA5 225 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 USMG5Q96IX5 58 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 VCX3BQ9H321 246 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 ZNF355PQ9NSJ1 428 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 SDHAF2Q9NX18 166 aa14.48□□□□□ -0.09
CCDC43-205ENST00000592333 METTL21EPA6NDL7 271 aa14.47□□□□□ -0.09
CCDC43-205ENST00000592333 SSBP2P81877 361 aaPredicted RBP14.47□□□□□ -0.09
CCDC43-205ENST00000592333 KLF5Q13887 457 aaPredicted RBP14.47□□□□□ -0.09
CCDC43-205ENST00000592333 TBCEQ15813 527 aaPredicted RBP14.47□□□□□ -0.09
CCDC43-205ENST00000592333 ANKRD13BQ86YJ7 626 aa14.47□□□□□ -0.09
CCDC43-205ENST00000592333 TEX45Q8NA69 505 aa14.47□□□□□ -0.09
CCDC43-205ENST00000592333 HARBI1Q96MB7 349 aa14.47□□□□□ -0.09
CCDC43-205ENST00000592333 CCDC90BQ9GZT6 254 aa14.47□□□□□ -0.09
CCDC43-205ENST00000592333 OR2D2Q9H210 308 aa14.47□□□□□ -0.09
CCDC43-205ENST00000592333 SIGLEC8Q9NYZ4 499 aa14.47□□□□□ -0.09
CCDC43-205ENST00000592333 NKX1-2Q9UD57 310 aaPredicted RBP14.47□□□□□ -0.09
CCDC43-205ENST00000592333 BLOC1S6Q9UL45 172 aa14.47□□□□□ -0.09
CCDC43-205ENST00000592333 IFITM5A6NNB3 132 aa14.46□□□□□ -0.09
CCDC43-205ENST00000592333 H0Y980 276 aa14.46□□□□□ -0.09
CCDC43-205ENST00000592333 RAB27BO00194 218 aa14.46□□□□□ -0.09
CCDC43-205ENST00000592333 MFNGO00587 321 aa14.46□□□□□ -0.09
CCDC43-205ENST00000592333 BET1O15155 118 aa14.46□□□□□ -0.09
CCDC43-205ENST00000592333 HSPA13P48723 471 aa14.46□□□□□ -0.09
CCDC43-205ENST00000592333 LINC00205P59089 165 aa14.46□□□□□ -0.09
CCDC43-205ENST00000592333 TATDN3Q17R31 274 aa14.46□□□□□ -0.09
CCDC43-205ENST00000592333 ZNF367Q7RTV3 350 aa14.46□□□□□ -0.09
CCDC43-205ENST00000592333 TINAGL1Q9GZM7 467 aaPredicted RBP14.46□□□□□ -0.09
CCDC43-205ENST00000592333 SHOXO15266 292 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 GSTT2P0CG29 244 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 GSTT2BP0CG30 244 aa14.45□□□□□ -0.1
CCDC43-205ENST00000592333 HIST1H1DP16402 221 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms