RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 C5orf30Q96GV9 206 aa7.22□□□□□ -1.25
DNMT1-223ENST00000591239 TSNAXQ99598 290 aaKnown RBP7.22□□□□□ -1.25
DNMT1-223ENST00000591239 OR51J1Q9H342 316 aa7.22□□□□□ -1.25
DNMT1-223ENST00000591239 FBXL15Q9H469 300 aa7.22□□□□□ -1.25
DNMT1-223ENST00000591239 SLC35D1Q9NTN3 355 aa7.22□□□□□ -1.25
DNMT1-223ENST00000591239 ZFP57Q9NU63 452 aa7.22□□□□□ -1.25
DNMT1-223ENST00000591239 COMMD3Q9UBI1 195 aa7.22□□□□□ -1.25
DNMT1-223ENST00000591239 ZNF580Q9UK33 172 aa7.22□□□□□ -1.25
DNMT1-223ENST00000591239 OR2W1Q9Y3N9 320 aa7.22□□□□□ -1.25
DNMT1-223ENST00000591239 FCN1O00602 326 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 ATP6V0E1O15342 81 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 SLC22A5O76082 557 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 IGHG4P01861 327 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 HLA-DQB1P01920 261 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 EIF4EP06730 217 aaKnown RBP7.21□□□□□ -1.26
DNMT1-223ENST00000591239 FCER2P06734 321 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 OR5H8P0DN80 308 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 DUTP33316 252 aaKnown RBP7.21□□□□□ -1.26
DNMT1-223ENST00000591239 CBX5P45973 191 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 THBS3P49746 956 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 TAS2R20P59543 309 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 RPL23AP62750 156 aaKnown RBP7.21□□□□□ -1.26
DNMT1-223ENST00000591239 CX3CL1P78423 397 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 DEFA6Q01524 100 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 TAGLNQ01995 201 aaKnown RBP7.21□□□□□ -1.26
DNMT1-223ENST00000591239 CFHR3Q02985 330 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 FOXE3Q13461 319 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 PSG5Q15238 335 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 RTL8BQ17RB0 113 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 TMEM69Q5SWH9 247 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 GPR141Q7Z602 305 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 ZNF645Q8N7E2 425 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 RNF152Q8N8N0 203 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 ACOT12Q8WYK0 555 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 SNAPC3Q92966 411 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 ADTRPQ96IZ2 230 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 PARP11Q9NR21 331 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 METTL1Q9UBP6 276 aaKnown RBP7.21□□□□□ -1.26
DNMT1-223ENST00000591239 WSB1Q9Y6I7 421 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 NOTCH3Q9UM47 2321 aa7.21□□□□□ -1.26
DNMT1-223ENST00000591239 IGKV1D-13A0A0B4J2D9 117 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 SMIM31A0A1B0GVY4 71 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 MEIS3P1A6NDR6 274 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 LINC00473A8K010 186 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 G3V318 75 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 G3V4G9 280 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 PLXNB1O43157 2135 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 SLC25A17O43808 307 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 HPGDSO60760 199 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 TUSC2O75896 110 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 SPDEFO95238 335 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 APOA1P02647 267 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 PF4P02776 101 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 RPLP1P05386 114 aaKnown RBP7.2□□□□□ -1.26
DNMT1-223ENST00000591239 ELANEP08246 267 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 IGKV1-13P0DP09 117 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 RRASP10301 218 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 PSMB8P28062 276 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 PPIFP30405 207 aaKnown RBP7.2□□□□□ -1.26
DNMT1-223ENST00000591239 LGALS7P47929 136 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 NDPQ00604 133 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 CBX3Q13185 183 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 CXorf66Q5JRM2 361 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-223ENST00000591239 ZNF660Q6AZW8 331 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-223ENST00000591239 LCNL1Q6ZST4 164 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 C18orf65Q6ZTR6 163 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 C1QL4Q86Z23 238 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 BVESQ8NE79 360 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 WFDC9Q8NEX5 89 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 OR5AP2Q8NGF4 316 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 DDB2Q92466 427 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 CMTM3Q96MX0 182 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 CLCC1Q96S66 551 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 IFT46Q9NQC8 304 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 NECAP2Q9NVZ3 263 aa7.2□□□□□ -1.26
DNMT1-223ENST00000591239 TRAV41A0A0B4J266 112 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 SRRM4A7MD48 611 aaKnown RBP7.19□□□□□ -1.26
DNMT1-223ENST00000591239 NUDT19A8MXV4 375 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 SHOXO15266 292 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 IGLV2-14P01704 120 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 IGLV2-23P01705 113 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 EGR2P11161 476 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-223ENST00000591239 ZNF182P17025 639 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-223ENST00000591239 ELK1P19419 428 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 CD33P20138 364 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 AADACP22760 399 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 SLC6A1P30531 599 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 FCGR2CP31995 323 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 PRSS3P35030 304 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 CDX1P47902 265 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-223ENST00000591239 CRIP2P52943 208 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-223ENST00000591239 TMEM177Q53S58 311 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 MZT2AQ6P582 158 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 ZNF562Q6V9R5 426 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 C8orf86Q6ZUL3 223 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 PPP1R27Q86WC6 154 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 ZNF695Q8IW36 515 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 MINDY2Q8NBR6 621 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 KLHL30-AS1Q8NEE0 82 aa7.19□□□□□ -1.26
DNMT1-223ENST00000591239 HARBI1Q96MB7 349 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms