RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TMEM127O75204 238 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 SCGNO76038 276 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 HLA-DRB1P01911 266 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 IGF1P05019 195 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 SMIM18P0DKX4 95 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 SOX6P35712 828 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 ARFRP1Q13795 201 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 IDNKQ5T6J7 187 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 GLDNQ6ZMI3 551 aaPredicted RBP8.8□□□□□ -1
SMAD4-211ENST00000590499 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.8□□□□□ -1
SMAD4-211ENST00000590499 NUDCD2Q8WVJ2 157 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 PHF21AQ96BD5 680 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 C5orf30Q96GV9 206 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 ZNF107Q9UII5 783 aaPredicted RBP8.8□□□□□ -1
SMAD4-211ENST00000590499 RNF150Q9ULK6 438 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 GAB2Q9UQC2 676 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 TNCP24821 2201 aa8.8□□□□□ -1
SMAD4-211ENST00000590499 BET1O15155 118 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 MC5RP33032 325 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 TALDO1P37837 337 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 RPS19P39019 145 aaKnown RBP8.79□□□□□ -1
SMAD4-211ENST00000590499 LINC00205P59089 165 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 RPL23AP62750 156 aaKnown RBP8.79□□□□□ -1
SMAD4-211ENST00000590499 DEFA6Q01524 100 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 PNLIPRP3Q17RR3 467 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 C5orf64Q2M2E5 130 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 H1FOOQ8IZA3 346 aaPredicted RBP8.79□□□□□ -1
SMAD4-211ENST00000590499 COMMD1Q8N668 190 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 RNF152Q8N8N0 203 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 ZNF383Q8NA42 475 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 OR10J5Q8NHC4 309 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 DCSTAMPQ9H295 470 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 ZNF221Q9UK13 617 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 SPATA2Q9UM82 520 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 WASHC3Q9Y3C0 194 aa8.79□□□□□ -1
SMAD4-211ENST00000590499 A0A0A6YYH2 397 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 IGHV7-81A0A0B4J1V7 117 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 A6NJ64 397 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 G3V4G9 280 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 RBBP9O75884 186 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 IGKV1-16P04430 117 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 TFAP2AP05549 437 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 OR8U9P0C7N5 309 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 MED14OSP0DP75 135 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 SLC35B1P78383 322 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 PITPNAQ00169 270 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 BEAN1Q3B7T3 259 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 KPRPQ5T749 579 aaPredicted RBP8.78□□□□□ -1
SMAD4-211ENST00000590499 ETV3LQ6ZN32 361 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 CROCCP3Q8IVE0 287 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 DRAXINQ8NBI3 349 aaPredicted RBP8.78□□□□□ -1
SMAD4-211ENST00000590499 WFDC9Q8NEX5 89 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 OR13F1Q8NGS4 319 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 OR8U1Q8NH10 309 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 RNF5Q99942 180 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 OR2D2Q9H210 308 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 SDHAF2Q9NX18 166 aa8.78□□□□□ -1
SMAD4-211ENST00000590499 M0R1X1 148 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 RRHO14718 337 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 RRP9O43818 475 aaKnown RBP8.77□□□□□ -1.01
SMAD4-211ENST00000590499 IGHG4P01861 327 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 PF4V1P10720 104 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 GNG2P59768 71 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 LSM3P62310 102 aaKnown RBP8.77□□□□□ -1.01
SMAD4-211ENST00000590499 NDPQ00604 133 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 FOXE3Q13461 319 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 C19orf54Q5BKX5 351 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 KHDC1LQ5JSQ8 128 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 TEX38Q6PEX7 206 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 C18orf65Q6ZTR6 163 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 PDPNQ86YL7 162 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 MYOZ3Q8TDC0 251 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 GINS4Q9BRT9 223 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 ST6GALNAC5Q9BVH7 336 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 FUNDC2Q9BWH2 189 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 GON7Q9BXV9 100 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 OR51J1Q9H342 316 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 FBXL15Q9H469 300 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 ZFP57Q9NU63 452 aa8.77□□□□□ -1.01
SMAD4-211ENST00000590499 TRAV18A0A075B6X5 111 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 H7C2Y5 167 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 ATP6V0E1O15342 81 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 SPDEFO95238 335 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 ELANEP08246 267 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 PSMB8P28062 276 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 PPIFP30405 207 aaKnown RBP8.76□□□□□ -1.01
SMAD4-211ENST00000590499 SLC6A1P30531 599 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 CRIP2P52943 208 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-211ENST00000590499 NCS1P62166 190 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 PSG5Q15238 335 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 LIN54Q6MZP7 749 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 CNIH2Q6PI25 160 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 DDB2Q92466 427 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 SLC25A46Q96AG3 418 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 AUNIPQ9H7T9 357 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 KIAA1456Q9P272 454 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 ANXA10Q9UJ72 324 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 FBXO7Q9Y3I1 522 aa8.76□□□□□ -1.01
SMAD4-211ENST00000590499 G3V318 75 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms