RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 METTL1Q9UBP6 276 aaKnown RBP9.47□□□□□ -0.89
TPM4-212ENST00000590180 SPATA2Q9UM82 520 aa9.47□□□□□ -0.89
TPM4-212ENST00000590180 A3GALT2U3KPV4 340 aa9.47□□□□□ -0.89
TPM4-212ENST00000590180 SSX5O60225 188 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 IGKV1-16P04430 117 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 NFYAP23511 347 aaPredicted RBP9.46□□□□□ -0.9
TPM4-212ENST00000590180 SLC6A1P30531 599 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 CDX1P47902 265 aaPredicted RBP9.46□□□□□ -0.9
TPM4-212ENST00000590180 THBS3P49746 956 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 RAB25P57735 213 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 CFHR3Q02985 330 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 TMEM267Q0VDI3 215 aaPredicted RBP9.46□□□□□ -0.9
TPM4-212ENST00000590180 CBX3Q13185 183 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 ECSCRQ19T08 205 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 CNIH2Q6PI25 160 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 MRPL41Q8IXM3 137 aaKnown RBP9.46□□□□□ -0.9
TPM4-212ENST00000590180 BVESQ8NE79 360 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 SLC25A38Q96DW6 304 aa9.46□□□□□ -0.9
TPM4-212ENST00000590180 S100A16Q96FQ6 103 aaKnown RBP9.46□□□□□ -0.9
TPM4-212ENST00000590180 CCL24O00175 119 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 SLC25A17O43808 307 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 TMEM127O75204 238 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 FCER2P06734 321 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 LGALS7P47929 136 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 LUMP51884 338 aaPredicted RBP9.45□□□□□ -0.9
TPM4-212ENST00000590180 ARPC4P59998 168 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 TAGLNQ01995 201 aaKnown RBP9.45□□□□□ -0.9
TPM4-212ENST00000590180 KPRPQ5T749 579 aaPredicted RBP9.45□□□□□ -0.9
TPM4-212ENST00000590180 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 ZNF562Q6V9R5 426 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 ETV3LQ6ZN32 361 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 PPP1R27Q86WC6 154 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 LINC00482Q8N8I6 264 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 RCC1LQ96I51 464 aaKnown RBP9.45□□□□□ -0.9
TPM4-212ENST00000590180 FUNDC2Q9BWH2 189 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 KLK15Q9H2R5 256 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 AUNIPQ9H7T9 357 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 ANXA10Q9UJ72 324 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 ZNF580Q9UK33 172 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 OR2W1Q9Y3N9 320 aa9.45□□□□□ -0.9
TPM4-212ENST00000590180 A0A0A6YYH2 397 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 A6NJ64 397 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 SHOXO15266 292 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 CNIH1O95406 144 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 DUS4LO95620 317 aaKnown RBP9.44□□□□□ -0.9
TPM4-212ENST00000590180 CA2P00918 260 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 RRASP10301 218 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 PTHLHP12272 177 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 PSMB8P28062 276 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 PPIFP30405 207 aaKnown RBP9.44□□□□□ -0.9
TPM4-212ENST00000590180 RAB9AP51151 201 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 GNB1P62873 340 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 RTL8BQ17RB0 113 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 DEFB136Q30KP8 78 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 UNQ5815/PRO19632Q6UWF5 114 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 GVQW1Q8N7I0 195 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 SAMD12Q8N8I0 201 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 RNF152Q8N8N0 203 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 BEST4Q8NFU0 473 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 C5orf30Q96GV9 206 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 RAX2Q96IS3 184 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 ADTRPQ96IZ2 230 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 OR5B12Q96R08 314 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 DCUN1D5Q9BTE7 237 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 FAM103A1Q9BTL3 118 aaKnown RBP9.44□□□□□ -0.9
TPM4-212ENST00000590180 NECAP2Q9NVZ3 263 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 FBXO7Q9Y3I1 522 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 NUBP2Q9Y5Y2 271 aa9.44□□□□□ -0.9
TPM4-212ENST00000590180 A0A1W2PN81 502 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 TRIM64CA6NLI5 447 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 XRCC3O43542 346 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 TUSC2O75896 110 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 SPDEFO95238 335 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 HLA-DQB1P01920 261 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 EGR2P11161 476 aaPredicted RBP9.43□□□□□ -0.9
TPM4-212ENST00000590180 CD40LGP29965 261 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 DUTP33316 252 aaKnown RBP9.43□□□□□ -0.9
TPM4-212ENST00000590180 CHRNA7P36544 502 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 VBP1P61758 197 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 NCS1P62166 190 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 NDPQ00604 133 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 FXYD3Q14802 87 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 HOGA1Q86XE5 327 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 ZNF491Q8N8L2 437 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 MINDY2Q8NBR6 621 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 LFNGQ8NES3 379 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 GRPEL2Q8TAA5 225 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 HARBI1Q96MB7 349 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 P2RX4Q99571 388 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 FOXA2Q9Y261 457 aaPredicted RBP9.43□□□□□ -0.9
TPM4-212ENST00000590180 VSIG4Q9Y279 399 aa9.43□□□□□ -0.9
TPM4-212ENST00000590180 MEIS3P1A6NDR6 274 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 SRRM4A7MD48 611 aaKnown RBP9.42□□□□□ -0.9
TPM4-212ENST00000590180 LINC00473A8K010 186 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 FCGR3BO75015 233 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 SLC22A5O76082 557 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 CRYZL1O95825 349 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 FCGR2CP31995 323 aa9.42□□□□□ -0.9
TPM4-212ENST00000590180 CBX5P45973 191 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms