RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ACOT13Q9NPJ3 140 aa6.48□□□□□ -1.37
DNMT1-219ENST00000589349 PARP11Q9NR21 331 aa6.48□□□□□ -1.37
DNMT1-219ENST00000589349 NECAP2Q9NVZ3 263 aa6.48□□□□□ -1.37
DNMT1-219ENST00000589349 AK3Q9UIJ7 227 aa6.48□□□□□ -1.37
DNMT1-219ENST00000589349 JPT1Q9UK76 154 aa6.48□□□□□ -1.37
DNMT1-219ENST00000589349 RNF150Q9ULK6 438 aa6.48□□□□□ -1.37
DNMT1-219ENST00000589349 LSM2Q9Y333 95 aaKnown RBP6.48□□□□□ -1.37
DNMT1-219ENST00000589349 RBM7Q9Y580 266 aaKnown RBP6.48□□□□□ -1.37
DNMT1-219ENST00000589349 A3GALT2U3KPV4 340 aa6.48□□□□□ -1.37
DNMT1-219ENST00000589349 V9GY05 133 aa6.48□□□□□ -1.37
DNMT1-219ENST00000589349 SMIM30A4D0T7 59 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 SLC17A2O00624 439 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 SLC22A1O15245 554 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 DENRO43583 198 aaKnown RBP6.47□□□□□ -1.37
DNMT1-219ENST00000589349 LANCL1O43813 399 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 CD3GP09693 182 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 PSMB9P28065 219 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 HOXD3P31249 432 aaPredicted RBP6.47□□□□□ -1.37
DNMT1-219ENST00000589349 RPL23AP62750 156 aaKnown RBP6.47□□□□□ -1.37
DNMT1-219ENST00000589349 UNC119Q13432 240 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 TPBGQ13641 420 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 ARFRP1Q13795 201 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 IRF3Q14653 427 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 PNLIPRP3Q17RR3 467 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 C2orf76Q3KRA6 126 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 C1orf100Q5SVJ3 147 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 MORN5Q5VZ52 161 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 ZNF367Q7RTV3 350 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 CCDC28AQ8IWP9 274 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 COMMD1Q8N668 190 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 C8orf31Q8N9H6 132 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 PHF21AQ96BD5 680 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 FAM3DQ96BQ1 224 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 ARHGAP5-AS1Q96IT6 56 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 CLCC1Q96S66 551 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 HDHD3Q9BSH5 251 aaPredicted RBP6.47□□□□□ -1.37
DNMT1-219ENST00000589349 RIMS4Q9H426 269 aaPredicted RBP6.47□□□□□ -1.37
DNMT1-219ENST00000589349 DUSP21Q9H596 190 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 LIN7CQ9NUP9 197 aaKnown RBP6.47□□□□□ -1.37
DNMT1-219ENST00000589349 ZNF107Q9UII5 783 aaPredicted RBP6.47□□□□□ -1.37
DNMT1-219ENST00000589349 ZNF221Q9UK13 617 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 WSB1Q9Y6I7 421 aa6.47□□□□□ -1.37
DNMT1-219ENST00000589349 SAA2-SAA4A0A096LPE2 208 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 RAB29O14966 203 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 BET1O15155 118 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 YPEL1O60688 119 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 SC5DO75845 299 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 ATP6V1G2O95670 118 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 IGHG2P01859 326 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 SAA2P0DJI9 122 aaPredicted RBP6.46□□□□□ -1.38
DNMT1-219ENST00000589349 ZBTB25P24278 435 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 GADD45AP24522 165 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 ACTBP60709 375 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 SSBP2P81877 361 aaPredicted RBP6.46□□□□□ -1.38
DNMT1-219ENST00000589349 HTD2P86397 168 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 Q3ZCU0 254 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 RPL39P5Q59GN2 51 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 C22orf42Q6IC83 251 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 LIN54Q6MZP7 749 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 GLDNQ6ZMI3 551 aaPredicted RBP6.46□□□□□ -1.38
DNMT1-219ENST00000589349 TMEM91Q6ZNR0 172 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 C18orf65Q6ZTR6 163 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 MOB1BQ7L9L4 216 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 OR2W3Q7Z3T1 314 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 ZNF695Q8IW36 515 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 Q8N9W7 124 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 OR8H1Q8NGG4 311 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 OR56B1Q8NGI3 324 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 RAB3CQ96E17 227 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 ABHD14BQ96IU4 210 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 YPEL2Q96QA6 119 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 OR5B12Q96R08 314 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 TM2D1Q9BX74 207 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 QTRT1Q9BXR0 403 aaKnown RBP6.46□□□□□ -1.38
DNMT1-219ENST00000589349 LPAR5Q9H1C0 372 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 ATG5Q9H1Y0 275 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 ABCG5Q9H222 651 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 ISYNA1Q9NPH2 558 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 C12orf4Q9NQ89 552 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 ZFP57Q9NU63 452 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 PIPOXQ9P0Z9 390 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 RAB22AQ9UL26 194 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 TRRAPQ9Y4A5 3859 aa6.46□□□□□ -1.38
DNMT1-219ENST00000589349 A0A0A6YYD4 124 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 METTL21EPA6NDL7 271 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 TMEM14DPA8MWL7 114 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 J3QRK9 145 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 CCL24O00175 119 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 NBR2O15453 112 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 SCTP09683 121 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 OR5H8P0DN80 308 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 RAB3BP20337 219 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 CNTFRP26992 372 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 OR10A3P58181 314 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 GNB1P62873 340 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 HLA-DRB3P79483 266 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 HMGN3Q15651 99 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 ECSCRQ19T08 205 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 DEFB136Q30KP8 78 aa6.45□□□□□ -1.38
DNMT1-219ENST00000589349 FAM131AQ6UXB0 335 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms