RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 MANBALQ9NQG1 85 aa11.81□□□□□ -0.52
NEDD4L-223ENST00000588516 RPRMQ9NS64 109 aa11.81□□□□□ -0.52
NEDD4L-223ENST00000588516 FREM1Q5H8C1 2179 aa11.81□□□□□ -0.52
NEDD4L-223ENST00000588516 ITPR2Q14571 2701 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 ELOA3CA0A087WX78 387 aaPredicted RBP11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 hCG_1809904A0A1W2PP81 198 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 A0A1W2PR64 198 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 A0A1W2PRV1 198 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 MAP1LC3B2A6NCE7 125 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 LRRC30A6NM36 301 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 TIMM8AO60220 97 aaPredicted RBP11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 CLDN1O95832 211 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 CYB5R3P00387 301 aaPredicted RBP11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 IGKV3-15P01624 115 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 OPN1MWP04001 364 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 OPN1MW2P0DN77 364 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 OPN1MW3P0DN78 364 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 IAPPP10997 89 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 COX5AP20674 150 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 GZMHP20718 246 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 KIR2DS2P43631 304 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 PSMB3P49720 205 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 CEBPGP53567 150 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 CD81P60033 236 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 KIAA0141Q14154 515 aaPredicted RBP11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 MBNL2Q5VZF2 373 aaKnown RBP11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 ACP7Q6ZNF0 438 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 Q6ZRM9 215 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 H2BFWTQ7Z2G1 175 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 WDR86Q86TI4 376 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 ZNF610Q8N9Z0 462 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 BTF3L4Q96K17 158 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 TRIB1Q96RU8 372 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 AGMATQ9BSE5 352 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 ACTR3CQ9C0K3 210 aaPredicted RBP11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 MAP1LC3BQ9GZQ8 125 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 RBKSQ9H477 322 aa11.8□□□□□ -0.52
NEDD4L-223ENST00000588516 ARID1AO14497 2285 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 CTXND1A0A1B0GTU2 59 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 TMEM250H0YL14 139 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 H3BP45 60 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 CYB5BO43169 146 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 HBZP02008 142 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 DAOP14920 347 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 S100A2P29034 98 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 OR3A1P47881 315 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 B2MP61769 119 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 RAB11AP62491 216 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 CTAG1AP78358 180 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 GUSBP1Q15486 140 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 ZNF674Q2M3X9 581 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 IGFL2Q6UWQ7 119 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 LHX4Q969G2 390 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 OR4C12Q96R67 309 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 GPHA2Q96T91 129 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 OR2D2Q9H210 308 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 NCOR1P1Q9H4R4 102 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 NAT8Q9UHE5 227 aa11.79□□□□□ -0.52
NEDD4L-223ENST00000588516 CNTRLQ7Z7A1 2325 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 C12orf77C9JDV5 145 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 MPDU1O75352 247 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 NXPH3O95157 252 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 P0C879 139 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 RND2P52198 227 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 GNB2P62879 340 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 C3orf36Q3SXR2 165 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 C5orf24Q7Z6I8 188 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 ZNF295-AS1Q8N0V1 137 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 RCC1LQ96I51 464 aaKnown RBP11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 GGACTQ9BVM4 153 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 PLSCR4Q9NRQ2 329 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 KCNIP2Q9NS61 270 aa11.78□□□□□ -0.52
NEDD4L-223ENST00000588516 RP1L1Q8IWN7 2480 aaPredicted RBP11.77□□□□□ -0.52
NEDD4L-223ENST00000588516 A0A1B0GWJ7 208 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 SMCO3A2RU48 225 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 ZFP92A6NM28 416 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 SEC14L6B5MCN3 397 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 ZNF737O75373 536 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 LYZL6O75951 148 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 HOXA5P20719 270 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 COL8A1P27658 744 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 GABRA2P47869 451 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 CDX1P47902 265 aaPredicted RBP11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 UQCRFS1P47985 274 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 OR2B8PP59922 312 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 KLRB1Q12918 225 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 ELOBQ15370 118 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 ACOT6Q3I5F7 207 aaPredicted RBP11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 RNFT1Q5M7Z0 435 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 DNLZQ5SXM8 178 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 LCN15Q6UWW0 184 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 CNEP1R1Q8N9A8 125 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 OR1L1Q8NH94 360 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 DTD1Q8TEA8 209 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 TXNDC17Q9BRA2 123 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 RSG1Q9BU20 258 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 SDF2L1Q9HCN8 221 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 TINAGQ9UJW2 476 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 PROCRQ9UNN8 238 aa11.77□□□□□ -0.53
NEDD4L-223ENST00000588516 CEBPZOSA8MTT3 80 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms