RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 LSM5Q9Y4Y9 91 aaKnown RBP8.34□□□□□ -1.07
APOC1-201ENST00000586638 FBN1P35555 2871 aaKnown RBP8.34□□□□□ -1.07
APOC1-201ENST00000586638 SAA2-SAA4A0A096LPE2 208 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 RNF222A6NCQ9 220 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 C22orf46C9J442 243 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 OVOL3O00110 214 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 ITGB1BP1O14713 200 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 RAMP3O60896 148 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 B3GALNT1O75752 331 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 S1PR2O95136 353 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 NXPH3O95157 252 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
APOC1-201ENST00000586638 SAA2P0DJI9 122 aaPredicted RBP8.33□□□□□ -1.08
APOC1-201ENST00000586638 RPA2P15927 270 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 PSMB6P28072 239 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 LPAR6P43657 344 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 AP2S1P53680 142 aaPredicted RBP8.33□□□□□ -1.08
APOC1-201ENST00000586638 DLX1P56177 255 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 IZUMO4Q1ZYL8 232 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 ZNF585BQ52M93 769 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 NMSQ5H8A3 153 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 WDR25Q64LD2 544 aaPredicted RBP8.33□□□□□ -1.08
APOC1-201ENST00000586638 HEPN1Q6WQI6 88 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 ZNF66Q6ZN08 573 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 C1orf229Q6ZS94 237 aaPredicted RBP8.33□□□□□ -1.08
APOC1-201ENST00000586638 LYG1Q8N1E2 194 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 FAM216AQ8WUB2 273 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 GPR146Q96CH1 333 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 PATZ1Q9HBE1 687 aaKnown RBP8.33□□□□□ -1.08
APOC1-201ENST00000586638 TNFSF18Q9UNG2 199 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 RCL1Q9Y2P8 373 aaKnown RBP8.33□□□□□ -1.08
APOC1-201ENST00000586638 TMED3Q9Y3Q3 217 aa8.33□□□□□ -1.08
APOC1-201ENST00000586638 MALRD1Q5VYJ5 2156 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 HMSDA8MTL9 139 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 K7EPK0 472 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 KCNAB3O43448 404 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 PROP1O75360 226 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 MBPP02686 304 aaPredicted RBP8.32□□□□□ -1.08
APOC1-201ENST00000586638 DUTP33316 252 aaKnown RBP8.32□□□□□ -1.08
APOC1-201ENST00000586638 AKR1C2P52895 323 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 GNB2P62879 340 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 PRB3Q04118 309 aaPredicted RBP8.32□□□□□ -1.08
APOC1-201ENST00000586638 NCR3LG1Q68D85 454 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 THOC7Q6I9Y2 204 aaKnown RBP8.32□□□□□ -1.08
APOC1-201ENST00000586638 PRSS54Q6PEW0 395 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 SLC25A48Q6ZT89 311 aaKnown RBP8.32□□□□□ -1.08
APOC1-201ENST00000586638 TMUB2Q71RG4 321 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 ZNF546Q86UE3 836 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 ODF3L1Q8IXM7 274 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 SPAG16Q8N0X2 631 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 FAM71E2Q8N5Q1 922 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 OR10A7Q8NGE5 316 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 OR4D5Q8NGN0 318 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 OR1S1Q8NH92 325 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 HSD17B10Q99714 261 aaKnown RBP8.32□□□□□ -1.08
APOC1-201ENST00000586638 SPIN2AQ99865 258 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 SPIN2BQ9BPZ2 258 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 RNF126Q9BV68 326 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 MFFQ9GZY8 342 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 SLA2Q9H6Q3 261 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 SESN1Q9Y6P5 492 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 ARHGAP32A7KAX9 2087 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 ARID1AO14497 2285 aa8.32□□□□□ -1.08
APOC1-201ENST00000586638 PPIAL4CA0A0B4J2A2 164 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 MSGN1A6NI15 193 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 CRLF1O75462 422 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 IGHV2-5P01817 119 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 PET100P0DJ07 73 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 PPIAL4GP0DN37 164 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 IGHV1-8P0DP01 117 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 LYL1P12980 280 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 VDAC1P21796 283 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 PDLIM4P50479 330 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 TMEM33P57088 247 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 BRWD1-AS2P59051 145 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 SMCO1Q147U7 214 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 OPCMLQ14982 345 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.31□□□□□ -1.08
APOC1-201ENST00000586638 C8orf46Q8TAG6 207 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 RRNAD1Q96FB5 475 aaKnown RBP8.31□□□□□ -1.08
APOC1-201ENST00000586638 ZNF251Q9BRH9 671 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 SSBP3Q9BWW4 388 aaPredicted RBP8.31□□□□□ -1.08
APOC1-201ENST00000586638 GSX2Q9BZM3 304 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 BPESC1Q9GZL8 116 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 ARL6Q9H0F7 186 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 HEXA-AS1Q9H8Q6 139 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 ONECUT1Q9UBC0 465 aa8.31□□□□□ -1.08
APOC1-201ENST00000586638 RGS13O14921 159 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 RAB29O14966 203 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 FCGR3BO75015 233 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 DEDDO75618 318 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 COX7A1P24310 79 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 G6PCP35575 357 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 NKX2-1P43699 371 aaPredicted RBP8.3□□□□□ -1.08
APOC1-201ENST00000586638 ESCO2Q56NI9 601 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 TMEM65Q6PI78 240 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 C11orf42Q8N5U0 333 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 CLDND2Q8NHS1 167 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 LSM10Q969L4 123 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms