RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 DHRS7BQ6IAN0 325 aaPredicted RBP10.33□□□□□ -0.76
VMP1-202ENST00000585847 C1orf229Q6ZS94 237 aaPredicted RBP10.33□□□□□ -0.76
VMP1-202ENST00000585847 DRAM1Q8N682 238 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 ZNF439Q8NDP4 499 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 OR11H7Q8NGC8 314 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 OR52B4Q8NGK2 314 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 RFESDQ8TAC1 157 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 CASTOR1Q8WTX7 329 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 RBPMSQ93062 196 aaKnown RBP10.33□□□□□ -0.76
VMP1-202ENST00000585847 TMEM186Q96B77 213 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 PDCD10Q9BUL8 212 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 IFI27L2Q9H2X8 130 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 METTL8Q9H825 291 aaKnown RBP10.33□□□□□ -0.76
VMP1-202ENST00000585847 CCL28Q9NRJ3 127 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 HIF1ANQ9NWT6 349 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 COMMD9Q9P000 198 aa10.33□□□□□ -0.76
VMP1-202ENST00000585847 FBN1P35555 2871 aaKnown RBP10.33□□□□□ -0.76
VMP1-202ENST00000585847 STAB1Q9NY15 2570 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 TRAV20A0A0B4J274 112 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 GOSR2O14653 212 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 HSD17B6O14756 317 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 CRLF1O75462 422 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 LY86O95711 162 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 OR5AC1P0C628 307 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 IGHV1-8P0DP01 117 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 RRASP10301 218 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 THBS3P49746 956 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 PRRX1P54821 245 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 CD83Q01151 205 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 NCR3LG1Q68D85 454 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 ZNF695Q8IW36 515 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 C11orf42Q8N5U0 333 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 BEND2Q8NDZ0 799 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 OR13D1Q8NGV5 346 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 LSM10Q969L4 123 aaKnown RBP10.32□□□□□ -0.76
VMP1-202ENST00000585847 TMEM133Q9H2Q1 129 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 HEXA-AS1Q9H8Q6 139 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 RANGRFQ9HD47 186 aaPredicted RBP10.32□□□□□ -0.76
VMP1-202ENST00000585847 PSG11Q9UQ72 335 aa10.32□□□□□ -0.76
VMP1-202ENST00000585847 MEX3AA1L020 520 aaKnown RBP10.31□□□□□ -0.76
VMP1-202ENST00000585847 FAM90A9PA6NNJ1 464 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 IGLV2-14P01704 120 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 MMP9P14780 707 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 CXCL3P19876 107 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 GATA3P23771 443 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 EIF4EBP1Q13541 118 aaPredicted RBP10.31□□□□□ -0.76
VMP1-202ENST00000585847 GNMTQ14749 295 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 SLC9A3R2Q15599 337 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 ANKRD55Q3KP44 614 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 BTNL3Q6UXE8 466 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 Q8N7P7 452 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 UXS1Q8NBZ7 420 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 OR2T35Q8NGX2 323 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 GLYATL2Q8WU03 294 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 C2orf50Q96LR7 162 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 PCGF1Q9BSM1 259 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 COA4Q9NYJ1 87 aa10.31□□□□□ -0.76
VMP1-202ENST00000585847 TOR1AO14656 332 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 FGF2P09038 288 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 CCL3L1P16619 93 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 PRTN3P24158 256 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 NFYBP25208 207 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 RAB13P51153 203 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 DLX1P56177 255 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 PRAMEF5Q5TYX0 476 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 TMEM268Q5VZI3 342 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 THOC7Q6I9Y2 204 aaKnown RBP10.3□□□□□ -0.76
VMP1-202ENST00000585847 NOXA1Q86UR1 476 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 OR10X1Q8NGY0 326 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 OR4S2Q8NH73 311 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 CLEC7AQ9BXN2 247 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 SIRPDQ9H106 197 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 PLEKHA2Q9HB19 425 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 SDHAF2Q9NX18 166 aa10.3□□□□□ -0.76
VMP1-202ENST00000585847 A0A1B0GU03 582 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 C5orf51A6NDU8 294 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 HMSDA8MTL9 139 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 OOSP1A8MZH6 123 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 SCAF4O95104 1147 aaKnown RBP10.29□□□□□ -0.76
VMP1-202ENST00000585847 DUTP33316 252 aaKnown RBP10.29□□□□□ -0.76
VMP1-202ENST00000585847 CEACAM3P40198 252 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 EIF2B2P49770 351 aaKnown RBP10.29□□□□□ -0.76
VMP1-202ENST00000585847 H2BFSP57053 126 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 ARF6P62330 175 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 SMCO1Q147U7 214 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 RTL8BQ17RB0 113 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 CT45A1Q5HYN5 189 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 DCAF12L2Q5VW00 463 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 TMEM65Q6PI78 240 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 ZNF833PQ6ZTB9 187 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 C5orf24Q7Z6I8 188 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 OR51H1Q8NH63 302 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 CT45A3Q8NHU0 189 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 TCTEX1D2Q8WW35 142 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 RRNAD1Q96FB5 475 aaKnown RBP10.29□□□□□ -0.76
VMP1-202ENST00000585847 TP53RKQ96S44 253 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 TBX15Q96SF7 602 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 YAE1D1Q9NRH1 226 aa10.29□□□□□ -0.76
VMP1-202ENST00000585847 SAA2-SAA4A0A096LPE2 208 aa10.28□□□□□ -0.76
VMP1-202ENST00000585847 IGHV3-43A0A0B4J1X8 118 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms