RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 OR51J1Q9H342 316 aa16.27■□□□□ 0.2
TOP3A-218ENST00000584669 PARP11Q9NR21 331 aa16.27■□□□□ 0.2
TOP3A-218ENST00000584669 SLC35D1Q9NTN3 355 aa16.27■□□□□ 0.2
TOP3A-218ENST00000584669 MEIS3P1A6NDR6 274 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 FCN1O00602 326 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 XRCC3O43542 346 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 IGF1P05019 195 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 CTXN2P0C2S0 81 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 VDAC1P21796 283 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 PLGLAQ15195 96 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 CTF1Q16619 201 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 GPR107Q5VW38 600 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 TEX38Q6PEX7 206 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 BEST4Q8NFU0 473 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 RNF5Q99942 180 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 GON7Q9BXV9 100 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 OR2W1Q9Y3N9 320 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 WSB1Q9Y6I7 421 aa16.26■□□□□ 0.19
TOP3A-218ENST00000584669 IGKV1D-13A0A0B4J2D9 117 aa16.25■□□□□ 0.19
TOP3A-218ENST00000584669 G3V318 75 aa16.25■□□□□ 0.19
TOP3A-218ENST00000584669 GABARAPO95166 117 aa16.25■□□□□ 0.19
TOP3A-218ENST00000584669 RPLP1P05386 114 aaKnown RBP16.25■□□□□ 0.19
TOP3A-218ENST00000584669 EIF4EP06730 217 aaKnown RBP16.25■□□□□ 0.19
TOP3A-218ENST00000584669 IGKV1-13P0DP09 117 aa16.25■□□□□ 0.19
TOP3A-218ENST00000584669 ALDH3B2P48448 385 aa16.25■□□□□ 0.19
TOP3A-218ENST00000584669 RPS16P62249 146 aaKnown RBP16.25■□□□□ 0.19
TOP3A-218ENST00000584669 NDPQ00604 133 aa16.25■□□□□ 0.19
TOP3A-218ENST00000584669 PSG5Q15238 335 aa16.25■□□□□ 0.19
TOP3A-218ENST00000584669 HOGA1Q86XE5 327 aa16.25■□□□□ 0.19
TOP3A-218ENST00000584669 KCTD12Q96CX2 325 aaKnown RBP16.25■□□□□ 0.19
TOP3A-218ENST00000584669 METTL1Q9UBP6 276 aaKnown RBP16.25■□□□□ 0.19
TOP3A-218ENST00000584669 FBXO7Q9Y3I1 522 aa16.25■□□□□ 0.19
TOP3A-218ENST00000584669 HLA-DQB1P01920 261 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 THBS3P49746 956 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 LUMP51884 338 aaPredicted RBP16.24■□□□□ 0.19
TOP3A-218ENST00000584669 TAS2R20P59543 309 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 ARPC4P59998 168 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 TMEM69Q5SWH9 247 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 BVESQ8NE79 360 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 WFDC9Q8NEX5 89 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 FLYWCH2Q96CP2 140 aaKnown RBP16.24■□□□□ 0.19
TOP3A-218ENST00000584669 CLCC1Q96S66 551 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 TSNAXQ99598 290 aaKnown RBP16.24■□□□□ 0.19
TOP3A-218ENST00000584669 TPSG1Q9NRR2 321 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 ZFP57Q9NU63 452 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 COMMD3Q9UBI1 195 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 ZNF580Q9UK33 172 aa16.24■□□□□ 0.19
TOP3A-218ENST00000584669 LINC00473A8K010 186 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 NUDT19A8MXV4 375 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 IGHG4P01861 327 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 DUTP33316 252 aaKnown RBP16.23■□□□□ 0.19
TOP3A-218ENST00000584669 CX3CL1P78423 397 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 FOXE3Q13461 319 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 CXorf66Q5JRM2 361 aaPredicted RBP16.23■□□□□ 0.19
TOP3A-218ENST00000584669 ETV3LQ6ZN32 361 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 C8orf86Q6ZUL3 223 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 ZNF645Q8N7E2 425 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 KLHL30-AS1Q8NEE0 82 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 DDB2Q92466 427 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 SNAPC3Q92966 411 aa16.23■□□□□ 0.19
TOP3A-218ENST00000584669 TNCP24821 2201 aa16.22■□□□□ 0.19
TOP3A-218ENST00000584669 TRAV41A0A0B4J266 112 aa16.22■□□□□ 0.19
TOP3A-218ENST00000584669 SLC25A17O43808 307 aa16.22■□□□□ 0.19
TOP3A-218ENST00000584669 TUSC2O75896 110 aa16.22■□□□□ 0.19
TOP3A-218ENST00000584669 IGLV2-23P01705 113 aa16.22■□□□□ 0.19
TOP3A-218ENST00000584669 ZNF660Q6AZW8 331 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-218ENST00000584669 GPR141Q7Z602 305 aa16.22■□□□□ 0.19
TOP3A-218ENST00000584669 SPDEFO95238 335 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 CA2P00918 260 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 IGLV2-14P01704 120 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 ELANEP08246 267 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 PPIFP30405 207 aaKnown RBP16.21■□□□□ 0.19
TOP3A-218ENST00000584669 CBX5P45973 191 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 RORCP51449 518 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 RNF152Q8N8N0 203 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 ADTRPQ96IZ2 230 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 HARBI1Q96MB7 349 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 IFT46Q9NQC8 304 aa16.21■□□□□ 0.19
TOP3A-218ENST00000584669 RBMX2Q9Y388 322 aaKnown RBP16.21■□□□□ 0.19
TOP3A-218ENST00000584669 HPGDSO60760 199 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 OR5H8P0DN80 308 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 EGR2P11161 476 aaPredicted RBP16.2■□□□□ 0.18
TOP3A-218ENST00000584669 AADACP22760 399 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 PSMB8P28062 276 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 FCGR2CP31995 323 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 RTL8BQ17RB0 113 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 ECSCRQ19T08 205 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 TMEM177Q53S58 311 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 C19orf54Q5BKX5 351 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 ZNF695Q8IW36 515 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 ABHD5Q8WTS1 349 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 RCC1LQ96I51 464 aaKnown RBP16.2■□□□□ 0.18
TOP3A-218ENST00000584669 DUX3Q96PT4 197 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 FAM103A1Q9BTL3 118 aaKnown RBP16.2■□□□□ 0.18
TOP3A-218ENST00000584669 KLK15Q9H2R5 256 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 A3GALT2U3KPV4 340 aa16.2■□□□□ 0.18
TOP3A-218ENST00000584669 SRRM4A7MD48 611 aaKnown RBP16.19■□□□□ 0.18
TOP3A-218ENST00000584669 SHOXO15266 292 aa16.19■□□□□ 0.18
TOP3A-218ENST00000584669 CRYZL1O95825 349 aa16.19■□□□□ 0.18
TOP3A-218ENST00000584669 APOA1P02647 267 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms