RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 SUPT4H1P63272 117 aaKnown RBP11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 PAX8Q06710 450 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 HLA-DRB5Q30154 266 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 VMO1Q7Z5L0 202 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 PNKDQ8N490 385 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 Q8N7P7 452 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 LRTM2Q8N967 370 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 AIFM2Q9BRQ8 373 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 PCGF1Q9BSM1 259 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 SIRPDQ9H106 197 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 GSX1Q9H4S2 264 aaPredicted RBP11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 RAB18Q9NP72 206 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 SIRT7Q9NRC8 400 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 MGAT4CQ9UBM8 478 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 NF1P21359 2839 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 ZANQ9Y493 2812 aa11.35□□□□□ -0.59
CSNK1D-209ENST00000578904 A0A1W2PPE3 182 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 LEUTXA8MZ59 168 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 SLC31A2O15432 143 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 CCNKO75909 580 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 IGLV2-14P01704 120 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 APOA2P02652 100 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 GAPDHP04406 335 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 ARG1P05089 322 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 COX7A1P24310 79 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 UCP1P25874 307 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 HTR1DP28221 377 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 DUTP33316 252 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 CYCSP99999 105 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 TMEM187Q14656 261 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 RTL8BQ17RB0 113 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 MINOS1Q5TGZ0 78 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 FAM53AQ6NSI3 398 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 GSG1LQ6UXU4 331 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 ZNF833PQ6ZTB9 187 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 RPEQ96AT9 228 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 PPP1R14BQ96C90 147 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 C7orf69Q9H7B7 122 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 AUP1Q9Y679 476 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 MINOS1-NBL1R4GNA1 71 aa11.34□□□□□ -0.59
CSNK1D-209ENST00000578904 OOSP1A8MZH6 123 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 BUB1B-PAK6H3BSN5 160 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 RBFOX2O43251 390 aaKnown RBP eCLIP11.33□□□□□ -0.62e-7■■■■□ 23.7
CSNK1D-209ENST00000578904 CDS2O95674 445 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 IGLV1-47P01700 117 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 SULT1A3P0DMM9 295 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 SULT1A4P0DMN0 295 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 HLA-GP17693 338 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 MC5RP33032 325 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 RAB13P51153 203 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 UBE2E1P51965 193 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 DHRS7BQ6IAN0 325 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 CCDC144NLQ6NUI1 221 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 Q71RC1 249 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 TGIF2LXQ8IUE1 241 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 TEX29Q8N6K0 151 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 OR4S2Q8NH73 311 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 RNASE11Q8TAA1 199 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 GLYATL2Q8WU03 294 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 RBPMSQ93062 196 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 TP53RKQ96S44 253 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 SPIN2AQ99865 258 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 SPIN2BQ9BPZ2 258 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 PDCD10Q9BUL8 212 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 TMED3Q9Y3Q3 217 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 TBL2Q9Y4P3 447 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
CSNK1D-209ENST00000578904 TLN2Q9Y4G6 2542 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 C5orf51A6NDU8 294 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 GOSR2O14653 212 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 ERVK-16P61578 105 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 EIF4EBP1Q13541 118 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 FCN2Q15485 313 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 SP6Q3SY56 376 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 RPL39P5Q59GN2 51 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 TMEM268Q5VZI3 342 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 ODF3L1Q8IXM7 274 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 SPAG16Q8N0X2 631 aa11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 RRNAD1Q96FB5 475 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-209ENST00000578904 DBX1A6NMT0 343 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 HPRT1P00492 218 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 MMP9P14780 707 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 HOXB4P17483 251 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 HNF1AP20823 631 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 VDAC1P21796 283 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 ANKRD55Q3KP44 614 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 MIDNQ504T8 468 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 GPR157Q5UAW9 335 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 FAM219AQ8IW50 185 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 OR8H3Q8N146 312 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 OR5M8Q8NGP6 311 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 LHX4Q969G2 390 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 TBX15Q96SF7 602 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 ZNF436Q9C0F3 470 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 PLEKHA2Q9HB19 425 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 ZFP57Q9NU63 452 aa11.31□□□□□ -0.6
CSNK1D-209ENST00000578904 COMMD9Q9P000 198 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms