RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	KHDC1L	Q5JSQ8	128 aa		10.7	□□□□□ -0.7
CSNK1D-208	ENST00000578501	KPRP	Q5T749	579 aa	Predicted RBP	10.7	□□□□□ -0.7
CSNK1D-208	ENST00000578501	HOGA1	Q86XE5	327 aa		10.7	□□□□□ -0.7
CSNK1D-208	ENST00000578501	FLYWCH2	Q96CP2	140 aa	Known RBP	10.7	□□□□□ -0.7
CSNK1D-208	ENST00000578501	C5orf30	Q96GV9	206 aa		10.7	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ADTRP	Q96IZ2	230 aa		10.7	□□□□□ -0.7
CSNK1D-208	ENST00000578501	CMTM3	Q96MX0	182 aa		10.7	□□□□□ -0.7
CSNK1D-208	ENST00000578501	MRPS26	Q9BYN8	205 aa	Known RBP	10.7	□□□□□ -0.7
CSNK1D-208	ENST00000578501	SLC35D1	Q9NTN3	355 aa		10.7	□□□□□ -0.7
CSNK1D-208	ENST00000578501	GABARAP	O95166	117 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	PSMB8	P28062	276 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	PPIF	P30405	207 aa	Known RBP	10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	LGALS7	P47929	136 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	LUM	P51884	338 aa	Predicted RBP	10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	CRIP2	P52943	208 aa	Predicted RBP	10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	VBP1	P61758	197 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	PSG5	Q15238	335 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	SAMD5	Q5TGI4	173 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ZNF645	Q8N7E2	425 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	SAMD12	Q8N8I0	201 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	BEST4	Q8NFU0	473 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ACOT12	Q8WYK0	555 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	FBXL15	Q9H469	300 aa		10.69	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ATP6V0E1	O15342	81 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	TUSC2	O75896	110 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	PF4	P02776	101 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	NFYA	P23511	347 aa	Predicted RBP	10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	DUT	P33316	252 aa	Known RBP	10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	CDX1	P47902	265 aa	Predicted RBP	10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ALDH3B2	P48448	385 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	RPS16	P62249	146 aa	Known RBP	10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	CX3CL1	P78423	397 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	CBX3	Q13185	183 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	PLGLA	Q15195	96 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	CTF1	Q16619	201 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	RTL8B	Q17RB0	113 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	VAX1	Q5SQQ9	334 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ZNF562	Q6V9R5	426 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	MINDY2	Q8NBR6	621 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	MRAP	Q8TCY5	172 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	DDB2	Q92466	427 aa		10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	METTL1	Q9UBP6	276 aa	Known RBP	10.68	□□□□□ -0.7
CSNK1D-208	ENST00000578501	TRAV41	A0A0B4J266	112 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501		G3V4G9	280 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	FCN1	O00602	326 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	IGLV1-40	P01703	118 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	IGLV2-14	P01704	120 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	APOA1	P02647	267 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	RPLP1	P05386	114 aa	Known RBP	10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	CD33	P20138	364 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	RORC	P51449	518 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ARPC4	P59998	168 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	TMEM177	Q53S58	311 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	C19orf54	Q5BKX5	351 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	TMEM69	Q5SWH9	247 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ZNF695	Q8IW36	515 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	GVQW1	Q8N7I0	195 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	TCTEX1D1	Q8N7M0	179 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	MYOZ3	Q8TDC0	251 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	PARP11	Q9NR21	331 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	NECAP2	Q9NVZ3	263 aa		10.67	□□□□□ -0.7
CSNK1D-208	ENST00000578501	PLXNB1	O43157	2135 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	NUDT19	A8MXV4	375 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501		G3V318	75 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	IGLV2-23	P01705	113 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	CRYGB	P07316	175 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	EGR2	P11161	476 aa	Predicted RBP	10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	MYCNOS	P40205	109 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	TAS2R20	P59543	309 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	NDP	Q00604	133 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	MSMO1	Q15800	293 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ETV3L	Q6ZN32	361 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	GPR141	Q7Z602	305 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	PPP1R27	Q86WC6	154 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	BVES	Q8NE79	360 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	KLHL30-AS1	Q8NEE0	82 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	OR5AP2	Q8NGF4	316 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	SNAPC3	Q92966	411 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	HARBI1	Q96MB7	349 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	NAA50	Q9GZZ1	169 aa	Known RBP	10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	COMMD3	Q9UBI1	195 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	ANAPC10	Q9UM13	185 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	RBMX2	Q9Y388	322 aa	Known RBP	10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	NUBP2	Q9Y5Y2	271 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	WSB1	Q9Y6I7	421 aa		10.66	□□□□□ -0.7
CSNK1D-208	ENST00000578501	IGKV1D-13	A0A0B4J2D9	117 aa		10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	SMIM31	A0A1B0GVY4	71 aa		10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	LINC00473	A8K010	186 aa		10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	SHOX	O15266	292 aa		10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	SLC25A17	O43808	307 aa		10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	DUS4L	O95620	317 aa	Known RBP	10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	IGKV1-13	P0DP09	117 aa		10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	PTHLH	P12272	177 aa		10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	NAT1	P18440	290 aa		10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	FCGR2C	P31995	323 aa		10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	KIAA0141	Q14154	515 aa	Predicted RBP	10.65	□□□□□ -0.7
CSNK1D-208	ENST00000578501	AKIRIN2	Q53H80	203 aa		10.65	□□□□□ -0.7

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