RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 COMMD3Q9UBI1 195 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 WASHC3Q9Y3C0 194 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 H0YJW9 148 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 M0R1X1 148 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 AP4M1O00189 453 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 NBR2O15453 112 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 RBBP9O75884 186 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 CBX5P45973 191 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 GLDNQ6ZMI3 551 aaPredicted RBP12.59□□□□□ -0.39
VAPA-204ENST00000577901 ZNF329Q86UD4 541 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 DRAXINQ8NBI3 349 aaPredicted RBP12.59□□□□□ -0.39
VAPA-204ENST00000577901 AP3S1Q92572 193 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 RBMXL1Q96E39 390 aaKnown RBP12.59□□□□□ -0.39
VAPA-204ENST00000577901 RITA1Q96K30 269 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 RNF5Q99942 180 aa12.59□□□□□ -0.39
VAPA-204ENST00000577901 SMIM31A0A1B0GVY4 71 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 PROP1O75360 226 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 APOA2P02652 100 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 THBS3P49746 956 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 ARPC4P59998 168 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 LIN54Q6MZP7 749 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 MZT2AQ6P582 158 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 HOGA1Q86XE5 327 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 BEST4Q8NFU0 473 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 NPBQ8NG41 125 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 NOL4LQ96MY1 436 aaPredicted RBP12.58□□□□□ -0.4
VAPA-204ENST00000577901 SDHAF2Q9NX18 166 aa12.58□□□□□ -0.4
VAPA-204ENST00000577901 ZNF107Q9UII5 783 aaPredicted RBP12.58□□□□□ -0.4
VAPA-204ENST00000577901 LINC01548A6NM66 108 aa12.57□□□□□ -0.4
VAPA-204ENST00000577901 APOA1P02647 267 aa12.57□□□□□ -0.4
VAPA-204ENST00000577901 LUMP51884 338 aaPredicted RBP12.57□□□□□ -0.4
VAPA-204ENST00000577901 RPL23AP62750 156 aaKnown RBP12.57□□□□□ -0.4
VAPA-204ENST00000577901 TAGLNQ01995 201 aaKnown RBP12.57□□□□□ -0.4
VAPA-204ENST00000577901 DCTN2Q13561 401 aaKnown RBP12.57□□□□□ -0.4
VAPA-204ENST00000577901 PDPNQ86YL7 162 aa12.57□□□□□ -0.4
VAPA-204ENST00000577901 STPG2Q8N412 459 aa12.57□□□□□ -0.4
VAPA-204ENST00000577901 COMMD1Q8N668 190 aa12.57□□□□□ -0.4
VAPA-204ENST00000577901 ZNF383Q8NA42 475 aa12.57□□□□□ -0.4
VAPA-204ENST00000577901 MCRIP2Q9BUT9 160 aaKnown RBP12.57□□□□□ -0.4
VAPA-204ENST00000577901 LINC00527Q9UJ94 153 aa12.57□□□□□ -0.4
VAPA-204ENST00000577901 OR2W1Q9Y3N9 320 aa12.57□□□□□ -0.4
VAPA-204ENST00000577901 J3QRK9 145 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 SLC22A5O76082 557 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 NDUFA3O95167 84 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 ZNF182P17025 639 aaPredicted RBP12.56□□□□□ -0.4
VAPA-204ENST00000577901 NFYAP23511 347 aaPredicted RBP12.56□□□□□ -0.4
VAPA-204ENST00000577901 CNTFRP26992 372 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 TAS2R20P59543 309 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 CBX3Q13185 183 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 PLGLAQ15195 96 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 C5orf64Q2M2E5 130 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 C8orf86Q6ZUL3 223 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 GVQW1Q8N7I0 195 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 FLYWCH2Q96CP2 140 aaKnown RBP12.56□□□□□ -0.4
VAPA-204ENST00000577901 ADTRPQ96IZ2 230 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 IFT46Q9NQC8 304 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 SLC35D1Q9NTN3 355 aa12.56□□□□□ -0.4
VAPA-204ENST00000577901 NUDT19A8MXV4 375 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 RRHO14718 337 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 HLA-DRB1P01911 266 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 HLA-DQB1P01920 261 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 EIF4EP06730 217 aaKnown RBP12.55□□□□□ -0.4
VAPA-204ENST00000577901 RRASP10301 218 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 PTHLHP12272 177 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 VDAC1P21796 283 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 PRSS3P35030 304 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 RPL5P46777 297 aaKnown RBP12.55□□□□□ -0.4
VAPA-204ENST00000577901 LINC00205P59089 165 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 RPS16P62249 146 aaKnown RBP12.55□□□□□ -0.4
VAPA-204ENST00000577901 TEX38Q6PEX7 206 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 C18orf65Q6ZTR6 163 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 CLVS1Q8IUQ0 354 aaPredicted RBP12.55□□□□□ -0.4
VAPA-204ENST00000577901 ZNF645Q8N7E2 425 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 RAB2BQ8WUD1 216 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 TSNAXQ99598 290 aaKnown RBP12.55□□□□□ -0.4
VAPA-204ENST00000577901 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 ZFP57Q9NU63 452 aa12.55□□□□□ -0.4
VAPA-204ENST00000577901 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
VAPA-204ENST00000577901 MRPS7Q9Y2R9 242 aaKnown RBP12.55□□□□□ -0.4
VAPA-204ENST00000577901 MEIS3P1A6NDR6 274 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 HPGDSO60760 199 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 IGF1P05019 195 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 OR5H8P0DN80 308 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 SLC6A1P30531 599 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 MYCNOSP40205 109 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 TMBIM6P55061 237 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 RTL8BQ17RB0 113 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 OR5AP2Q8NGF4 316 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 BCL7BQ9BQE9 202 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 FBXL15Q9H469 300 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 ZNF580Q9UK33 172 aa12.54□□□□□ -0.4
VAPA-204ENST00000577901 FAM25AB3EWG3 89 aa12.53□□□□□ -0.4
VAPA-204ENST00000577901 FAM25CB3EWG5 89 aa12.53□□□□□ -0.4
VAPA-204ENST00000577901 FAM25GB3EWG6 89 aa12.53□□□□□ -0.4
VAPA-204ENST00000577901 NOL3O60936 208 aaKnown RBP12.53□□□□□ -0.4
VAPA-204ENST00000577901 TUSC2O75896 110 aa12.53□□□□□ -0.4
VAPA-204ENST00000577901 SPDEFO95238 335 aa12.53□□□□□ -0.4
VAPA-204ENST00000577901 IGKV1-16P04430 117 aa12.53□□□□□ -0.4
VAPA-204ENST00000577901 FCER2P06734 321 aa12.53□□□□□ -0.4
VAPA-204ENST00000577901 ELK1P19419 428 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms