RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.07□□□□□ -0.8
COPS3-214ENST00000577246 PTX4Q96A99 478 aa10.07□□□□□ -0.8
COPS3-214ENST00000577246 GGTLC1Q9BX51 225 aa10.07□□□□□ -0.8
COPS3-214ENST00000577246 TMEM59Q9BXS4 323 aa10.07□□□□□ -0.8
COPS3-214ENST00000577246 C11orf54Q9H0W9 315 aaPredicted RBP10.07□□□□□ -0.8
COPS3-214ENST00000577246 ZC4H2Q9NQZ6 224 aa10.07□□□□□ -0.8
COPS3-214ENST00000577246 SLC35D1Q9NTN3 355 aa10.07□□□□□ -0.8
COPS3-214ENST00000577246 TNCP24821 2201 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 A0A1W2PPK0 400 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 MPPED1O15442 326 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 ATP5HO75947 161 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 TAGLNQ01995 201 aaKnown RBP10.06□□□□□ -0.8
COPS3-214ENST00000577246 EXOSC2Q13868 293 aaKnown RBP10.06□□□□□ -0.8
COPS3-214ENST00000577246 DEFB114Q30KQ6 69 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 GLT8D1Q68CQ7 371 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
COPS3-214ENST00000577246 PGLYRP3Q96LB9 341 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 HARBI1Q96MB7 349 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 DERL3Q96Q80 235 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 PARP12Q9H0J9 701 aaKnown RBP10.06□□□□□ -0.8
COPS3-214ENST00000577246 WFDC10AQ9H1F0 79 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 PLEKHJ1Q9NW61 149 aa10.06□□□□□ -0.8
COPS3-214ENST00000577246 DIMT1Q9UNQ2 313 aaKnown RBP10.06□□□□□ -0.8
COPS3-214ENST00000577246 LOC102724200A0A096LPH7 203 aaPredicted RBP10.05□□□□□ -0.8
COPS3-214ENST00000577246 TRBV6-6A0A0A6YYG2 114 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 M0R1X1 148 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 BMPR1BO00238 502 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 DYNC1I1O14576 645 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 OR9G9P0C7N8 305 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 KIR2DS2P43631 304 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 RPS27AP62979 156 aaKnown RBP10.05□□□□□ -0.8
COPS3-214ENST00000577246 HLA-DRB3P79483 266 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 SSBP2P81877 361 aaPredicted RBP10.05□□□□□ -0.8
COPS3-214ENST00000577246 RHOGP84095 191 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 DEFA5Q01523 94 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 ATP5G2Q06055 141 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 PJVKQ0ZLH3 352 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 ANKRD55Q3KP44 614 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 TTC23Q5W5X9 447 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 ADAD2Q8NCV1 583 aaKnown RBP10.05□□□□□ -0.8
COPS3-214ENST00000577246 KCNG3Q8TAE7 436 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 APH1BQ8WW43 257 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 PYDC1Q8WXC3 89 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 C9orf16Q9BUW7 83 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 OR1A1Q9P1Q5 309 aa10.05□□□□□ -0.8
COPS3-214ENST00000577246 MSGN1A6NI15 193 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 SHOXO15266 292 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 CREBL2O60519 120 aaPredicted RBP10.04□□□□□ -0.8
COPS3-214ENST00000577246 LALBAP00709 142 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 IGLV2-23P01705 113 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 CRYGBP07316 175 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 FOLR2P14207 255 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
COPS3-214ENST00000577246 ATF4P18848 351 aaPredicted RBP10.04□□□□□ -0.8
COPS3-214ENST00000577246 TNFRSF9Q07011 255 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 RTL8BQ17RB0 113 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 VMA21Q3ZAQ7 101 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 ZFP1Q6P2D0 407 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 TMEM217Q8N7C4 229 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 CYYR1Q96J86 154 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 TM2D1Q9BX74 207 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 ZNF230Q9UIE0 474 aaPredicted RBP10.04□□□□□ -0.8
COPS3-214ENST00000577246 TP53TG1Q9Y2A0 90 aa10.04□□□□□ -0.8
COPS3-214ENST00000577246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.03□□□□□ -0.8
COPS3-214ENST00000577246 C2orf70A6NJV1 201 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 LGALS9O00182 355 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 GGCTO75223 188 aaKnown RBP10.03□□□□□ -0.8
COPS3-214ENST00000577246 PROP1O75360 226 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 RRASP10301 218 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 HTR2CP28335 458 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 BMI1P35226 326 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 SERPINB10P48595 397 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 SMN1Q16637 294 aaKnown RBP10.03□□□□□ -0.8
COPS3-214ENST00000577246 WFDC3Q8IUB2 231 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 ZFP41Q8N8Y5 198 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 NECAP1Q8NC96 275 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 ZNF555Q8NEP9 628 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 OR52B4Q8NGK2 314 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 WDR89Q96FK6 387 aaPredicted RBP10.03□□□□□ -0.8
COPS3-214ENST00000577246 TMEM80Q96HE8 168 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 AKIP1Q9NQ31 210 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 C12orf4Q9NQ89 552 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 HERC2O95714 4834 aa10.03□□□□□ -0.8
COPS3-214ENST00000577246 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 ACTL6BO94805 426 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 BPNT1O95861 308 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 CD1AP06126 327 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 APELAP0DMC3 54 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 APOC4P55056 127 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 LINC00205P59089 165 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 TPBGQ13641 420 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 TNXAQ16473 311 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 ZNF57Q68EA5 555 aaPredicted RBP10.02□□□□□ -0.81
COPS3-214ENST00000577246 SLC25A42Q86VD7 318 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 RPP25LQ8N5L8 163 aaKnown RBP10.02□□□□□ -0.81
COPS3-214ENST00000577246 TEX45Q8NA69 505 aa10.02□□□□□ -0.81
COPS3-214ENST00000577246 SRSF12Q8WXF0 261 aaKnown RBP10.02□□□□□ -0.81
COPS3-214ENST00000577246 SPIN2AQ99865 258 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms