RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	SMIM6	P0DI80	62 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	RAC2	P15153	192 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	ATP5G3	P48201	142 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	TBC1D28	Q2M2D7	210 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	TGIF2LY	Q8IUE0	185 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	EGLN1	Q9GZT9	426 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	IL36G	Q9NZH8	169 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	KCNIP1	Q9NZI2	227 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	ABI3	Q9P2A4	366 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	TMEM265	A0A087WTH1	108 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	S100A8	P05109	93 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	APELA	P0DMC3	54 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	GNG10	P50151	68 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	ZNF766	Q5HY98	468 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	FBXW9	Q5XUX1	488 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	NCR3LG1	Q68D85	454 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	RPRML	Q8N4K4	120 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	KLF14	Q8TD94	323 aa	Predicted RBP	12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	TAF15	Q92804	592 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	SPAAR	A0A1B0GVQ0	90 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	SPRY3	O43610	288 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	DFFB	O76075	338 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	GATA2	P23769	480 aa	Predicted RBP	12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	CTAG1A	P78358	180 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	COL10A1	Q03692	680 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	RTL8A	Q9BWD3	113 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	QTRT1	Q9BXR0	403 aa	Known RBP	12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	LRP5L	A4QPB2	252 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	SH2D1B	O14796	132 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	MLNR	O43193	412 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	ARR3	P36575	388 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	ZNF83	P51522	516 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	ZNF506	Q5JVG8	444 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	H2BFWT	Q7Z2G1	175 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	CA5BP1	Q8WTZ4	195 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	RAB24	Q969Q5	203 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR51M1	Q9H341	326 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	PLSCR2	Q9NRY7	297 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	GRIFIN	A4D1Z8	144 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	HOXA5	P20719	270 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	MOB3B	Q86TA1	216 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	FAM185A	Q8N0U4	392 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	GALM	Q96C23	342 aa		12.42	□□□□□ -0.42
PRPF8-216	ENST00000577001	NAV3	Q8IVL0	2385 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001		J3QT63	122 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	FOLR2	P14207	255 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	CD81	P60033	236 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	CYB5R2	Q6BCY4	276 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	SMPD2	O60906	423 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	FRMD6-AS1	P0C7T7	363 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	SLC25A6	P12236	298 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	FAM78B	Q5VT40	261 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	C1orf87	Q8N0U7	546 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	COMMD1	Q8N668	190 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	DTD1	Q8TEA8	209 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	PACRG	Q96M98	296 aa	Predicted RBP	12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	IMMP2L	Q96T52	175 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	WDR61	Q9GZS3	305 aa	Known RBP	12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	PARL	Q9H300	379 aa		12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	SEBOX	Q9HB31	216 aa	Predicted RBP	12.41	□□□□□ -0.42
PRPF8-216	ENST00000577001	CLDN34	H7C241	214 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	C1QTNF9	P0C862	333 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	HBG1	P69891	147 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	HBG2	P69892	147 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	DEFA6	Q01524	100 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	TNFRSF9	Q07011	255 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	BCL2L2	Q92843	193 aa	Predicted RBP	12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	ATG101	Q9BSB4	218 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	HEYL	Q9NQ87	328 aa	Predicted RBP	12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	DCAF16	Q9NXF7	216 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001		M0R1X1	148 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	NDUFB4	O95168	129 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	CDX1	P47902	265 aa	Predicted RBP	12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	UCP2	P55851	309 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	MIC13	Q5XKP0	118 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001		Q6ZSR3	168 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	ZNF709	Q8N972	641 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	ZNF114	Q8NC26	417 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR13D1	Q8NGV5	346 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR4X1	Q8NH49	305 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	ZNF391	Q9UJN7	358 aa		12.4	□□□□□ -0.42
PRPF8-216	ENST00000577001	HCFC1	P51610	2035 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001		A0A1B0GU03	582 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001		H7BYZ3	331 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001	AQP7	O14520	342 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001	DLX1	P56177	255 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001	BRWD1-AS2	P59051	145 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001	KRTAP27-1	Q3LI81	207 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001	FDCSP	Q8NFU4	85 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001	LRRC29	Q8WV35	223 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001	RAB40C	Q96S21	281 aa		12.4	□□□□□ -0.43
PRPF8-216	ENST00000577001	IGF2R	P11717	2491 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	OR9G9	P0C7N8	305 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	HOXC12	P31275	282 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	GALR1	P47211	349 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	MLANA	Q16655	118 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	COQ2	Q96H96	371 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	XKRY2	A2RUG3	117 aa		12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms