RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SLC25A17O43808 307 aa16.32■□□□□ 0.2
CHRNB1-206ENST00000574054 SPDEFO95238 335 aa16.32■□□□□ 0.2
CHRNB1-206ENST00000574054 CRHBPP24387 322 aa16.32■□□□□ 0.2
CHRNB1-206ENST00000574054 AKIRIN2Q53H80 203 aa16.32■□□□□ 0.2
CHRNB1-206ENST00000574054 PDPNQ86YL7 162 aa16.32■□□□□ 0.2
CHRNB1-206ENST00000574054 FLYWCH2Q96CP2 140 aaKnown RBP16.32■□□□□ 0.2
CHRNB1-206ENST00000574054 RAB22AQ9UL26 194 aa16.32■□□□□ 0.2
CHRNB1-206ENST00000574054 FABP7O15540 132 aa16.31■□□□□ 0.2
CHRNB1-206ENST00000574054 TRGV3P03979 118 aa16.31■□□□□ 0.2
CHRNB1-206ENST00000574054 PSMD7P51665 324 aa16.31■□□□□ 0.2
CHRNB1-206ENST00000574054 FXYD3Q14802 87 aa16.31■□□□□ 0.2
CHRNB1-206ENST00000574054 OR4A4PQ8NGN8 299 aa16.31■□□□□ 0.2
CHRNB1-206ENST00000574054 RAB3CQ96E17 227 aa16.31■□□□□ 0.2
CHRNB1-206ENST00000574054 ZNF355PQ9NSJ1 428 aa16.31■□□□□ 0.2
CHRNB1-206ENST00000574054 SLC35D1Q9NTN3 355 aa16.31■□□□□ 0.2
CHRNB1-206ENST00000574054 LDLRAD4O15165 306 aa16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 CNIH1O95406 144 aa16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 HSPB1P04792 205 aaKnown RBP16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 OR8U9P0C7N5 309 aa16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 SPNP16150 400 aa16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 SERPINB10P48595 397 aa16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 PITPNAQ00169 270 aa16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 OR2D2Q9H210 308 aa16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 SLA2Q9H6Q3 261 aa16.3■□□□□ 0.2
CHRNB1-206ENST00000574054 RYR3Q15413 4870 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 A0A075B6Q4 140 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 PDCD5O14737 125 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 FCGR3AP08637 254 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 OR10A3P58181 314 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 MOGAT2Q3SYC2 334 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 IGSF11Q5DX21 431 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 ACSM6Q6P461 480 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 ZNF367Q7RTV3 350 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 OR6Q1Q8NGQ2 317 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 OR10J5Q8NHC4 309 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 MAFIPQ8WZ33 124 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 VCX3BQ9H321 246 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 KCNK7Q9Y2U2 307 aa16.29■□□□□ 0.2
CHRNB1-206ENST00000574054 ARPC1BO15143 372 aaKnown RBP16.28■□□□□ 0.2
CHRNB1-206ENST00000574054 GNB3P16520 340 aa16.28■□□□□ 0.2
CHRNB1-206ENST00000574054 GADD45AP24522 165 aa16.28■□□□□ 0.2
CHRNB1-206ENST00000574054 OR5T1Q8NG75 326 aa16.28■□□□□ 0.2
CHRNB1-206ENST00000574054 RHOVQ96L33 236 aa16.28■□□□□ 0.2
CHRNB1-206ENST00000574054 CNBD2Q96M20 576 aa16.28■□□□□ 0.2
CHRNB1-206ENST00000574054 HARBI1Q96MB7 349 aa16.28■□□□□ 0.2
CHRNB1-206ENST00000574054 OR4C12Q96R67 309 aa16.28■□□□□ 0.2
CHRNB1-206ENST00000574054 RBM7Q9Y580 266 aaKnown RBP16.28■□□□□ 0.2
CHRNB1-206ENST00000574054 C13orf42A0A1B0GVH6 325 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 GSTT2P0CG29 244 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 GSTT2BP0CG30 244 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 GP9P14770 177 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 MYL9P24844 172 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 PJVKQ0ZLH3 352 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 CBX3Q13185 183 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 TBCEQ15813 527 aaPredicted RBP16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 SSX1Q16384 188 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 IZUMO2Q6UXV1 221 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 OVCH2Q7RTZ1 564 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 POC5Q8NA72 575 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 OR10R2Q8NGX6 335 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 CABLES2Q9BTV7 478 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 SDHAF2Q9NX18 166 aa16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 ZNF230Q9UIE0 474 aaPredicted RBP16.27■□□□□ 0.2
CHRNB1-206ENST00000574054 A0A0B4J203 849 aa16.26■□□□□ 0.19
CHRNB1-206ENST00000574054 TRAV1-2A0A0B4J238 106 aa16.26■□□□□ 0.19
CHRNB1-206ENST00000574054 LGALS7P47929 136 aa16.26■□□□□ 0.19
CHRNB1-206ENST00000574054 GINS4Q9BRT9 223 aa16.26■□□□□ 0.19
CHRNB1-206ENST00000574054 RSRP1Q9BUV0 290 aa16.26■□□□□ 0.19
CHRNB1-206ENST00000574054 ELOVL1Q9BW60 279 aa16.26■□□□□ 0.19
CHRNB1-206ENST00000574054 BLOC1S6Q9UL45 172 aa16.26■□□□□ 0.19
CHRNB1-206ENST00000574054 HUWE1Q7Z6Z7 4374 aaKnown RBP16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 TRBV6-7A0A0A0MS04 114 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 SHISA3A0PJX4 238 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 ANKRD34BA5PLL1 514 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 IFITM5A6NNB3 132 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 IGLV2-23P01705 113 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 HIST1H1DP16402 221 aaKnown RBP16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 TALDO1P37837 337 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 HSPA13P48723 471 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 ARFRP1Q13795 201 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 HAPLN4Q86UW8 402 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 SBSPONQ8IVN8 264 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 BVESQ8NE79 360 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 C5orf30Q96GV9 206 aa16.25■□□□□ 0.19
CHRNB1-206ENST00000574054 TRIM64CA6NLI5 447 aa16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 H3BUA1 57 aa16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 MFNGO00587 321 aa16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 SHOXO15266 292 aa16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 FRMD6-AS1P0C7T7 363 aa16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 RAB3BP20337 219 aa16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 SSBP2P81877 361 aaPredicted RBP16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 SRSF7Q16629 238 aaKnown RBP eCLIP16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 RTL8BQ17RB0 113 aa16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 NDUFB11Q9NX14 153 aa16.24■□□□□ 0.19
CHRNB1-206ENST00000574054 A0A0G2JLM5 398 aa16.23■□□□□ 0.19
CHRNB1-206ENST00000574054 METTL21EPA6NDL7 271 aa16.23■□□□□ 0.19
CHRNB1-206ENST00000574054 RAB6AP20340 208 aa16.23■□□□□ 0.19
CHRNB1-206ENST00000574054 ZP3P21754 424 aa16.23■□□□□ 0.19
CHRNB1-206ENST00000574054 DEFA5Q01523 94 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms