RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PRELID3BQ9Y3B1 194 aa10.17□□□□□ -0.78
TRAPPC1-206ENST00000573989 CTDSPLO15194 276 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 NBR2O15453 112 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 KCNAB3O43448 404 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 PROP1O75360 226 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 IFNA6P05013 189 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 TBPP20226 339 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 AADACP22760 399 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 TNFSF8P32971 234 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 DUTP33316 252 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 RFX2P48378 723 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 PROK1P58294 105 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 FXYD4P59646 89 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 RPS16P62249 146 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 PLGLAQ15195 96 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 FBLN7Q53RD9 439 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 RNASE12Q5GAN4 147 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 DHRS11Q6UWP2 260 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 ZNF383Q8NA42 475 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 SMIM4Q8WVI0 70 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 WFDC12Q8WWY7 111 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 TSNAXQ99598 290 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 HSD17B10Q99714 261 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 ZNF2Q9BSG1 426 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 SLC5A7Q9GZV3 580 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 TAS2R8Q9NYW2 309 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 KLK11Q9UBX7 282 aa10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 ZNF107Q9UII5 783 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 RBMX2Q9Y388 322 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-206ENST00000573989 IGKV1D-13A0A0B4J2D9 117 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 AMY1AP04745 511 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 AMY2AP04746 511 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 CSF1P09603 554 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 IGKV1-13P0DP09 117 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 VSIG10L2P0DP72 767 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 S100GP29377 79 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 LGALS7P47929 136 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 F2RL1P55085 397 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 TAS2R19P59542 299 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 RNASE10Q5GAN6 216 aaKnown RBP10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 SPANXN2Q5MJ10 180 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 LPCAT3Q6P1A2 487 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 ZNF66Q6ZN08 573 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 KCTD9Q7L273 389 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 LYSMD2Q8IV50 215 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 FOXRED2Q8IWF2 684 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 FAM71E2Q8N5Q1 922 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 Q8N9W7 124 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 NPBQ8NG41 125 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 SIGLEC9Q9Y336 463 aa10.15□□□□□ -0.78
TRAPPC1-206ENST00000573989 SPDEFO95238 335 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 IGHG2P01859 326 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 PTBP1P26599 531 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 KIR2DS2P43631 304 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 DGCR2P98153 550 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 CATR1Q13166 79 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 VAX1Q5SQQ9 334 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 SLC35E3Q7Z769 313 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 CMTM1Q8IZ96 169 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 KLHDC1Q8N7A1 406 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 TMEM229BQ8NBD8 167 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 MOB3AQ96BX8 217 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 GON7Q9BXV9 100 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 PLSCR3Q9NRY6 295 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 SERTAD4Q9NUC0 356 aa10.14□□□□□ -0.79
TRAPPC1-206ENST00000573989 RRHO14718 337 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 SHOXO15266 292 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 NDUFA3O95167 84 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 IGKV1-16P04430 117 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 MEF2DQ14814 521 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 C5orf64Q2M2E5 130 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 ZNF660Q6AZW8 331 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 LIN54Q6MZP7 749 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 Q6ZS46 218 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 CENPVQ7Z7K6 275 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 ARRDC1Q8N5I2 433 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 POC5Q8NA72 575 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 BVESQ8NE79 360 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 CHPT1Q8WUD6 406 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 TCTEX1D2Q8WW35 142 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 C5orf30Q96GV9 206 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 HARBI1Q96MB7 349 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 CCL28Q9NRJ3 127 aa10.13□□□□□ -0.79
TRAPPC1-206ENST00000573989 SH2D7A6NKC9 451 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 LINC00473A8K010 186 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 AP4M1O00189 453 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 GSTZ1O43708 216 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 RAB3DO95716 219 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 IGLV2-14P01704 120 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 HLA-DRB1P01911 266 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 CD3DP04234 171 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 CNTFRP26992 372 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 LINC00205P59089 165 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 SLC35B1P78383 322 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 TMEM177Q53S58 311 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 PYDC2Q56P42 97 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 STEAP1BQ6NZ63 245 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 MFSD4AQ8N468 514 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 OR4S2Q8NH73 311 aa10.12□□□□□ -0.79
TRAPPC1-206ENST00000573989 OSR1Q8TAX0 266 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms