RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 DUTP33316 252 aaKnown RBP13.73□□□□□ -0.21
LITAF-212ENST00000573332 ETV6P41212 452 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 PROK1P58294 105 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 RNASE12Q5GAN4 147 aaKnown RBP13.73□□□□□ -0.21
LITAF-212ENST00000573332 GLDNQ6ZMI3 551 aaPredicted RBP13.73□□□□□ -0.21
LITAF-212ENST00000573332 PDPNQ86YL7 162 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 Q8N9W7 124 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 TMEM229BQ8NBD8 167 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 OR6Q1Q8NGQ2 317 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 OR6F1Q8NGZ6 308 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 DDB2Q92466 427 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 MOB3AQ96BX8 217 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 BATF3Q9NR55 127 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 V9GYH0 126 aa13.73□□□□□ -0.21
LITAF-212ENST00000573332 APOA2P02652 100 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 CD74P04233 296 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 LINC00205P59089 165 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 EIF4EBP1Q13541 118 aaPredicted RBP13.72□□□□□ -0.21
LITAF-212ENST00000573332 ABCA11PQ4W5N1 156 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 Q6ZS46 218 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 FAM71E2Q8N5Q1 922 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 NPBQ8NG41 125 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 BORCS5Q969J3 196 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 RITA1Q96K30 269 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 ZNF2Q9BSG1 426 aaPredicted RBP13.72□□□□□ -0.21
LITAF-212ENST00000573332 ZNF747Q9BV97 191 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 SERTAD4Q9NUC0 356 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 LIN7CQ9NUP9 197 aaKnown RBP13.72□□□□□ -0.21
LITAF-212ENST00000573332 TAS2R8Q9NYW2 309 aa13.72□□□□□ -0.21
LITAF-212ENST00000573332 NCBP2LA6PVI3 153 aaKnown RBP13.71□□□□□ -0.21
LITAF-212ENST00000573332 NDUFA3O95167 84 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 CD3DP04234 171 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 RRASP10301 218 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 F2RL1P55085 397 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 TAS2R19P59542 299 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 HERV-K104P61576 105 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 RNASE10Q5GAN6 216 aaKnown RBP13.71□□□□□ -0.21
LITAF-212ENST00000573332 ZNF66Q6ZN08 573 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 ARRDC1Q8N5I2 433 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 SECTM1Q8WVN6 248 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 HSD17B10Q99714 261 aaKnown RBP13.71□□□□□ -0.21
LITAF-212ENST00000573332 SLC5A7Q9GZV3 580 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 CCL28Q9NRJ3 127 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 SLC35D1Q9NTN3 355 aa13.71□□□□□ -0.21
LITAF-212ENST00000573332 LINC00473A8K010 186 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 H7C2Y5 167 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 NBR2O15453 112 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 CSF1P09603 554 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 FXYD4P59646 89 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 TSPAN5P62079 268 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 MMDQ15546 238 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 C3orf56Q8N813 242 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 FLYWCH2Q96CP2 140 aaKnown RBP13.7□□□□□ -0.22
LITAF-212ENST00000573332 RBMXL1Q96E39 390 aaKnown RBP13.7□□□□□ -0.22
LITAF-212ENST00000573332 WNT10AQ9GZT5 417 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 SIGLEC9Q9Y336 463 aa13.7□□□□□ -0.22
LITAF-212ENST00000573332 M0QYG6 137 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 IGHG2P01859 326 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 IGKV1-16P04430 117 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 GNRHRP30968 328 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 UCP3P55916 312 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 ZNF79Q15937 498 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 RTL8BQ17RB0 113 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 TMEM177Q53S58 311 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 STEAP1BQ6NZ63 245 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 TMEM17Q86X19 198 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 BVESQ8NE79 360 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 WFDC12Q8WWY7 111 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 RASL11BQ9BPW5 248 aa13.69□□□□□ -0.22
LITAF-212ENST00000573332 TINAGL1Q9GZM7 467 aaPredicted RBP13.69□□□□□ -0.22
LITAF-212ENST00000573332 ANKRD20A5PA0PJZ0 165 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 SPDEFO95238 335 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 RAB3DO95716 219 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 IFNA6P05013 189 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 CNTFRP26992 372 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 LGALS7P47929 136 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 RPL30P62888 115 aaKnown RBP13.68□□□□□ -0.22
LITAF-212ENST00000573332 CBX3Q13185 183 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 C5orf64Q2M2E5 130 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 AADACL3Q5VUY0 350 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 LPCAT3Q6P1A2 487 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 ZNF818PQ6ZRF7 136 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 LINC00299Q6ZSB3 139 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 KCTD9Q7L273 389 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 LHFPL1Q86WI0 220 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 MFSD4AQ8N468 514 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 TSNAXQ99598 290 aaKnown RBP13.68□□□□□ -0.22
LITAF-212ENST00000573332 THAP7Q9BT49 309 aaPredicted RBP13.68□□□□□ -0.22
LITAF-212ENST00000573332 FXYD6Q9H0Q3 95 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 KIAA1456Q9P272 454 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 PRELID3BQ9Y3B1 194 aa13.68□□□□□ -0.22
LITAF-212ENST00000573332 SH2D7A6NKC9 451 aaPredicted RBP13.67□□□□□ -0.22
LITAF-212ENST00000573332 RRHO14718 337 aa13.67□□□□□ -0.22
LITAF-212ENST00000573332 HLA-DRB1P01911 266 aa13.67□□□□□ -0.22
LITAF-212ENST00000573332 VDAC2P45880 294 aaPredicted RBP13.67□□□□□ -0.22
LITAF-212ENST00000573332 RPS16P62249 146 aaKnown RBP13.67□□□□□ -0.22
LITAF-212ENST00000573332 MEF2DQ14814 521 aa13.67□□□□□ -0.22
LITAF-212ENST00000573332 PYDC2Q56P42 97 aa13.67□□□□□ -0.22
LITAF-212ENST00000573332 SHISA2Q6UWI4 295 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms