RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 DRAM1Q8N682 238 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 ZNF645Q8N7E2 425 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 OR4P4Q8NGL7 312 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 SSMEM1Q8WWF3 244 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 ST6GALNAC6Q969X2 333 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 ABHD14BQ96IU4 210 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 ZNF251Q9BRH9 671 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 CHIAQ9BZP6 476 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 MMP28Q9H239 520 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 GHITMQ9H3K2 345 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 GAB2Q9UQC2 676 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 KMT2CQ8NEZ4 4911 aaKnown RBP11.08□□□□□ -0.64
RPAIN-209ENST00000571558 IGHV3OR16-10A0A075B7F0 116 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 ARPC1BO15143 372 aaKnown RBP11.07□□□□□ -0.64
RPAIN-209ENST00000571558 CTSDP07339 412 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-209ENST00000571558 PGAM2P15259 253 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 UBE2E1P51965 193 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 PROK1P58294 105 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 HLA-DRB5Q30154 266 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-209ENST00000571558 PLET1Q6UQ28 207 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 C1QL4Q86Z23 238 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 MINDY2Q8NBR6 621 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 ADAD2Q8NCV1 583 aaKnown RBP11.07□□□□□ -0.64
RPAIN-209ENST00000571558 BVESQ8NE79 360 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 LINC01006Q8NI28 216 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 ZFAND1Q8TCF1 268 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 TMEM230Q96A57 120 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 CREB3L1Q96BA8 519 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 ZNF486Q96H40 463 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-209ENST00000571558 SCGB3A2Q96PL1 93 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 SDHAF2Q9NX18 166 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 ZNF221Q9UK13 617 aa11.07□□□□□ -0.64
RPAIN-209ENST00000571558 SOX21Q9Y651 276 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-209ENST00000571558 TRAV6A0A075B6T7 132 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 SAA2-SAA4A0A096LPE2 208 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 CENPVL3A0A0U1RRI6 287 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 MDFIC2A0A1B0GVS7 189 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 LY6LH3BQJ8 138 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 BUB1B-PAK6H3BSN5 160 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 RAB29O14966 203 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 SLC22A5O76082 557 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 H2AFB2P0C5Z0 115 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 SAA2P0DJI9 122 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-209ENST00000571558 PRRX1P54821 245 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 KRTAP10-3P60369 221 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 RND3P61587 244 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 TRIM16LQ309B1 348 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-209ENST00000571558 LHX4Q969G2 390 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 AJUBAQ96IF1 538 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 AKR1E2Q96JD6 320 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 ALX4Q9H161 411 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-209ENST00000571558 SLC2A9Q9NRM0 540 aa11.06□□□□□ -0.64
RPAIN-209ENST00000571558 RBM7Q9Y580 266 aaKnown RBP11.06□□□□□ -0.64
RPAIN-209ENST00000571558 GPR31O00270 319 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 TOR1AO14656 332 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 HSD17B6O14756 317 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 PEX14O75381 377 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 ARG1P05089 322 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 ANXA7P20073 488 aaKnown RBP11.05□□□□□ -0.64
RPAIN-209ENST00000571558 GPR12P47775 334 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 BEAN1Q3B7T3 259 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 RPL39P5Q59GN2 51 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 BRD3OSQ6XYD6 125 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 ZNF833PQ6ZTB9 187 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 SLC25A42Q86VD7 318 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 LYG1Q8N1E2 194 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 ZBTB34Q8NCN2 500 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 OR10X1Q8NGY0 326 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 PIPOXQ9P0Z9 390 aa11.05□□□□□ -0.64
RPAIN-209ENST00000571558 A0A0B4J293 547 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 PGLYRP1O75594 196 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-209ENST00000571558 TSPAN15O95858 294 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 RLN1P04808 185 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 VSIG10L2P0DP72 767 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 PIGPP57054 158 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 DHODHQ02127 395 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 DIAPH2-AS1Q14236 149 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 PHLDA2Q53GA4 152 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 FAM71F2Q6NXP2 309 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 TMED4Q7Z7H5 227 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 PDZD9Q8IXQ8 264 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 GPHA2Q96T91 129 aa11.04□□□□□ -0.64
RPAIN-209ENST00000571558 C14orf166Q9Y224 244 aaKnown RBP11.04□□□□□ -0.64
RPAIN-209ENST00000571558 IGHV1-69DA0A0B4J2H0 117 aa11.03□□□□□ -0.64
RPAIN-209ENST00000571558 CRYM-AS1A6NIL9 109 aa11.03□□□□□ -0.64
RPAIN-209ENST00000571558 INMT-MINDY4F8WBC2 141 aa11.03□□□□□ -0.64
RPAIN-209ENST00000571558 IGHV1-69P01742 117 aa11.03□□□□□ -0.64
RPAIN-209ENST00000571558 HTR1DP28221 377 aa11.03□□□□□ -0.64
RPAIN-209ENST00000571558 RAB25P57735 213 aa11.03□□□□□ -0.64
RPAIN-209ENST00000571558 UBE2MP61081 183 aaKnown RBP11.03□□□□□ -0.64
RPAIN-209ENST00000571558 RPL30P62888 115 aaKnown RBP11.03□□□□□ -0.64
RPAIN-209ENST00000571558 SUPT4H1P63272 117 aaKnown RBP11.03□□□□□ -0.64
RPAIN-209ENST00000571558 CMTM1Q8IZ96 169 aa11.03□□□□□ -0.64
RPAIN-209ENST00000571558 FAM110DQ8TAY7 271 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-209ENST00000571558 CAPSLQ8WWF8 208 aa11.03□□□□□ -0.64
RPAIN-209ENST00000571558 TNFRSF19Q9NS68 423 aa11.03□□□□□ -0.64
RPAIN-209ENST00000571558 AMMECR1Q9Y4X0 333 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-209ENST00000571558 A0A1W2PRD5 423 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms