RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 GGTLC1Q9BX51 225 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 C11orf54Q9H0W9 315 aaPredicted RBP8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 OR1A1Q9P1Q5 309 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 ZNF221Q9UK13 617 aa8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 KLK5Q9Y337 293 aaPredicted RBP8.87□□□□□ -0.99
GTF3C1-209ENST00000568569 DNAH10Q8IVF4 4471 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 FAM223BA6NKX1 122 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 RBMXL2O75526 392 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 LALBAP00709 142 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 IGLV2-23P01705 113 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 CRYGBP07316 175 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 APELAP0DMC3 54 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 MYL12AP19105 171 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 KIR2DS2P43631 304 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 EXOSC2Q13868 293 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 FAM223AQ8IWN6 122 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 CBR4Q8N4T8 237 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 ADAD2Q8NCV1 583 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 APH1BQ8WW43 257 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 PHB2Q99623 299 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 SLC35D1Q9NTN3 355 aa8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 TECRQ9NZ01 308 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 ZNF230Q9UIE0 474 aaPredicted RBP8.86□□□□□ -0.99
GTF3C1-209ENST00000568569 RYR1P21817 5038 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 LOC102724200A0A096LPH7 203 aaPredicted RBP8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 A0A0J9YWU9 116 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 C2orf70A6NJV1 201 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 M0R1X1 148 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 DEDDO75618 318 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 TUSC2O75896 110 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 NDUFB8O95169 186 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 OR9G9P0C7N8 305 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 UBBP0CG47 229 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 FOLR2P14207 255 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 RASSF2P50749 326 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 HLA-DRB3P79483 266 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 RHOGP84095 191 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 TNFRSF9Q07011 255 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 ZFP41Q8N8Y5 198 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 PYDC1Q8WXC3 89 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 THRSPQ92748 146 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 WDR89Q96FK6 387 aaPredicted RBP8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 HARBI1Q96MB7 349 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 DERL3Q96Q80 235 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 TMEM59Q9BXS4 323 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 RIMS4Q9H426 269 aaPredicted RBP8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 AKIP1Q9NQ31 210 aa8.85□□□□□ -0.99
GTF3C1-209ENST00000568569 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 TRBV6-6A0A0A6YYG2 114 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 LOC100130705A0A1B0GUX0 176 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 IRGMA1A4Y4 181 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 MSGN1A6NI15 193 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 MPPED1O15442 326 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 HTR2CP28335 458 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 RPS27AP62979 156 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 ATP5G2Q06055 141 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 CBX3Q13185 183 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 SMN1Q16637 294 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 FAM209BQ5JX69 171 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 OR10K2Q6IF99 312 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 WFDC3Q8IUB2 231 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 KCNG3Q8TAE7 436 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 GATAD1Q8WUU5 269 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 TM2D1Q9BX74 207 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 PLEKHJ1Q9NW61 149 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 CLEC2DQ9UHP7 191 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 MGAT4AQ9UM21 535 aa8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 DIMT1Q9UNQ2 313 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 EXOSC1Q9Y3B2 195 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-209ENST00000568569 TRBV9A0A0B4J1U6 114 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 LGALS9O00182 355 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 SHOXO15266 292 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 CIB2O75838 187 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 ATF4P18848 351 aaPredicted RBP8.83□□□□□ -1
GTF3C1-209ENST00000568569 MAPK3P27361 379 aaPredicted RBP8.83□□□□□ -1
GTF3C1-209ENST00000568569 BMI1P35226 326 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 TAS2R43P59537 309 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 EWSR1Q01844 656 aaKnown RBP eCLIP8.83□□□□□ -1
GTF3C1-209ENST00000568569 MED21Q13503 144 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 LGALS9CQ6DKI2 356 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 LYG2Q86SG7 212 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 OR52B4Q8NGK2 314 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 NICN1Q9BSH3 213 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 TP53TG1Q9Y2A0 90 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 KIAA1109Q2LD37 5005 aa8.83□□□□□ -1
GTF3C1-209ENST00000568569 PNMA8CA0A1B0GUJ8 204 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 GGCTO75223 188 aaKnown RBP8.82□□□□□ -1
GTF3C1-209ENST00000568569 WBP4O75554 376 aaKnown RBP8.82□□□□□ -1
GTF3C1-209ENST00000568569 PRH1P02810 166 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 SCTP09683 121 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 EDN2P20800 178 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 MAP2K4P45985 399 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 TAGLNQ01995 201 aaKnown RBP8.82□□□□□ -1
GTF3C1-209ENST00000568569 ZNF45Q02386 682 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 TNXAQ16473 311 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 RTL8BQ17RB0 113 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 ANKRD55Q3KP44 614 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 TMEM177Q53S58 311 aa8.82□□□□□ -1
GTF3C1-209ENST00000568569 ZNF57Q68EA5 555 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms