RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 RAB11BQ15907 218 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 C2orf76Q3KRA6 126 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 LIPKQ5VXJ0 399 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 OVCH2Q7RTZ1 564 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 OR4A4PQ8NGN8 299 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 ARHGAP5-AS1Q96IT6 56 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 RDH8Q9NYR8 311 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 AK6Q9Y3D8 172 aaKnown RBP11.52□□□□□ -0.57
RNF40-209ENST00000566703 TENM3Q9P273 2699 aa11.52□□□□□ -0.57
RNF40-209ENST00000566703 NBEAL2Q6ZNJ1 2754 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 IGKV1-6A0A0C4DH72 117 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 IGLV1-51P01701 117 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 CRYGBP07316 175 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 POC5Q8NA72 575 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 FAM3DQ96BQ1 224 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 CENPOQ9BU64 300 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 RAB22AQ9UL26 194 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 V9GY05 133 aa11.51□□□□□ -0.57
RNF40-209ENST00000566703 C13orf42A0A1B0GVH6 325 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 TRIM64CA6NLI5 447 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 M0R1X1 148 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 LDLRAD4O15165 306 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 DENRO43583 198 aaKnown RBP11.5□□□□□ -0.57
RNF40-209ENST00000566703 SLC25A17O43808 307 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 CNIH1O95406 144 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 LINC00205P59089 165 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 MLLT11Q13015 90 aaPredicted RBP11.5□□□□□ -0.57
RNF40-209ENST00000566703 PLAC9Q5JTB6 97 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 ANKRD13BQ86YJ7 626 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 Q8N1Y9 231 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 ZNF355PQ9NSJ1 428 aa11.5□□□□□ -0.57
RNF40-209ENST00000566703 FABP7O15540 132 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 IGLV2-23P01705 113 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 CD3GP09693 182 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 HSMCR30P0CW71 290 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 RRASP10301 218 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 AADACP22760 399 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 RPS25P62851 125 aaKnown RBP11.49□□□□□ -0.57
RNF40-209ENST00000566703 MRPS15P82914 257 aaKnown RBP11.49□□□□□ -0.57
RNF40-209ENST00000566703 KLF5Q13887 457 aaPredicted RBP11.49□□□□□ -0.57
RNF40-209ENST00000566703 TATDN3Q17R31 274 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 OR5T1Q8NG75 326 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 GRPEL2Q8TAA5 225 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 CITED4Q96RK1 184 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 TM2D3Q9BRN9 247 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 CABLES2Q9BTV7 478 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 ACOT13Q9NPJ3 140 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 C19orf73Q9NVV2 129 aa11.49□□□□□ -0.57
RNF40-209ENST00000566703 TRBV6-7A0A0A0MS04 114 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 H0Y980 276 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 RGS10O43665 173 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 LYL1P12980 280 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 SNRPBP14678 240 aaKnown RBP11.48□□□□□ -0.57
RNF40-209ENST00000566703 CALRP27797 417 aaKnown RBP11.48□□□□□ -0.57
RNF40-209ENST00000566703 SSBP2P81877 361 aaPredicted RBP11.48□□□□□ -0.57
RNF40-209ENST00000566703 CBX3Q13185 183 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 SRSF7Q16629 238 aaKnown RBP eCLIP11.48□□□□□ -0.57
RNF40-209ENST00000566703 TMEM177Q53S58 311 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 SGPP2Q8IWX5 399 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 OR10J5Q8NHC4 309 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 RAB3CQ96E17 227 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 MGLLQ99685 303 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 SDHAF2Q9NX18 166 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 SIGLEC8Q9NYZ4 499 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 KCNK7Q9Y2U2 307 aa11.48□□□□□ -0.57
RNF40-209ENST00000566703 IGHV4-30-4P0DP06 118 aa11.47□□□□□ -0.57
RNF40-209ENST00000566703 CLDN12P56749 244 aa11.47□□□□□ -0.57
RNF40-209ENST00000566703 FABP5Q01469 135 aa11.47□□□□□ -0.57
RNF40-209ENST00000566703 ZNF343Q6P1L6 599 aa11.47□□□□□ -0.57
RNF40-209ENST00000566703 PRSS48Q7RTY5 328 aa11.47□□□□□ -0.57
RNF40-209ENST00000566703 OR9G4Q8NGQ1 327 aa11.47□□□□□ -0.57
RNF40-209ENST00000566703 ADTRPQ96IZ2 230 aa11.47□□□□□ -0.57
RNF40-209ENST00000566703 HARBI1Q96MB7 349 aa11.47□□□□□ -0.57
RNF40-209ENST00000566703 TINAGL1Q9GZM7 467 aaPredicted RBP11.47□□□□□ -0.57
RNF40-209ENST00000566703 PEF1Q9UBV8 284 aaKnown RBP11.47□□□□□ -0.57
RNF40-209ENST00000566703 TRAV1-2A0A0B4J238 106 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 TMEM272A0A1B0GTI8 110 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 PDCD5O14737 125 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 SHOXO15266 292 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 FCGR3AP08637 254 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 GSTT2P0CG29 244 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 GSTT2BP0CG30 244 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 GADD45AP24522 165 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 PJVKQ0ZLH3 352 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 RTL8BQ17RB0 113 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 IGSF11Q5DX21 431 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 IL34Q6ZMJ4 242 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 Q6ZS49 121 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 TEX45Q8NA69 505 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 BVESQ8NE79 360 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 OR10R2Q8NGX6 335 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 RSRP1Q9BUV0 290 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 OR2D2Q9H210 308 aa11.46□□□□□ -0.57
RNF40-209ENST00000566703 ANKRD34BA5PLL1 514 aa11.45□□□□□ -0.58
RNF40-209ENST00000566703 SRRM4A7MD48 611 aaKnown RBP11.45□□□□□ -0.58
RNF40-209ENST00000566703 MFNGO00587 321 aa11.45□□□□□ -0.58
RNF40-209ENST00000566703 BET1O15155 118 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms